Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL6A2P12110 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.01□□□□□ -0.17
COL6A2P12110 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COL6A2P12110 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.01□□□□□ -0.17
COL6A2P12110 AC026954.1-201ENST00000429771 1293 ntBASIC14.01□□□□□ -0.17
COL6A2P12110 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.01□□□□□ -0.17
COL6A2P12110 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A2P12110 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.01□□□□□ -0.17
COL6A2P12110 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A2P12110 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.01□□□□□ -0.17
COL6A2P12110 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.01□□□□□ -0.17
COL6A2P12110 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.01□□□□□ -0.17
COL6A2P12110 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A2P12110 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.01□□□□□ -0.17
COL6A2P12110 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL6A2P12110 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A2P12110 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.01□□□□□ -0.17
COL6A2P12110 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL6A2P12110 POM121L14P-201ENST00000406100 1558 ntBASIC14□□□□□ -0.17
COL6A2P12110 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 AL139158.3-201ENST00000641212 1562 ntBASIC14□□□□□ -0.17
COL6A2P12110 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 AC073862.5-201ENST00000624129 2027 ntBASIC14□□□□□ -0.17
COL6A2P12110 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 LINC01815-202ENST00000641468 1409 ntBASIC14□□□□□ -0.17
COL6A2P12110 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14□□□□□ -0.17
COL6A2P12110 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14□□□□□ -0.17
COL6A2P12110 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14□□□□□ -0.17
COL6A2P12110 AP005018.1-201ENST00000525475 301 ntBASIC14□□□□□ -0.17
COL6A2P12110 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14□□□□□ -0.17
COL6A2P12110 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14□□□□□ -0.17
COL6A2P12110 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
COL6A2P12110 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
COL6A2P12110 FMO6P-201ENST00000236166 1620 ntBASIC14□□□□□ -0.17
COL6A2P12110 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL6A2P12110 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
COL6A2P12110 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.99□□□□□ -0.17
COL6A2P12110 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
COL6A2P12110 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.99□□□□□ -0.17
COL6A2P12110 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL6A2P12110 BEND3P3-201ENST00000611030 2440 ntBASIC13.99□□□□□ -0.17
COL6A2P12110 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL6A2P12110 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.99□□□□□ -0.17
COL6A2P12110 COX5BP8-201ENST00000416911 349 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms