Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC23.72■■□□□ 1.39
TOP2AP11388 DLX4-206ENST00000611342 1662 ntBASIC23.72■■□□□ 1.39
TOP2AP11388 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.72■■□□□ 1.39
TOP2AP11388 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
TOP2AP11388 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TOP2AP11388 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TOP2AP11388 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TOP2AP11388 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC23.71■■□□□ 1.39
TOP2AP11388 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC23.71■■□□□ 1.39
TOP2AP11388 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC23.71■■□□□ 1.39
TOP2AP11388 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC23.71■■□□□ 1.39
TOP2AP11388 CDC37P2-201ENST00000562287 1029 ntBASIC23.71■■□□□ 1.39
TOP2AP11388 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC23.71■■□□□ 1.39
TOP2AP11388 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
TOP2AP11388 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC23.71■■□□□ 1.39
TOP2AP11388 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
TOP2AP11388 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC23.71■■□□□ 1.39
TOP2AP11388 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TOP2AP11388 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
TOP2AP11388 AC020917.4-201ENST00000623994 1999 ntBASIC23.71■■□□□ 1.39
TOP2AP11388 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TOP2AP11388 PI4KAP2-201ENST00000360806 2080 ntBASIC23.7■■□□□ 1.39
TOP2AP11388 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC23.7■■□□□ 1.38
TOP2AP11388 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 SNORA30.1-201ENST00000363193 129 ntBASIC23.7■■□□□ 1.38
TOP2AP11388 IQCF4-203ENST00000428561 420 ntBASIC23.7■■□□□ 1.38
TOP2AP11388 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC23.7■■□□□ 1.38
TOP2AP11388 ABCD1P3-201ENST00000562927 605 ntBASIC23.7■■□□□ 1.38
TOP2AP11388 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC23.7■■□□□ 1.38
TOP2AP11388 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC23.7■■□□□ 1.38
TOP2AP11388 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC23.7■■□□□ 1.38
TOP2AP11388 KRT8P24-201ENST00000560290 1559 ntBASIC23.7■■□□□ 1.38
TOP2AP11388 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TOP2AP11388 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TOP2AP11388 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC23.7■■□□□ 1.38
TOP2AP11388 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TOP2AP11388 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC23.7■■□□□ 1.38
TOP2AP11388 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC23.7■■□□□ 1.38
TOP2AP11388 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC23.69■■□□□ 1.38
TOP2AP11388 HNRNPA1P3-201ENST00000440968 551 ntBASIC23.69■■□□□ 1.38
TOP2AP11388 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 SLC25A51P3-201ENST00000521814 889 ntBASIC23.69■■□□□ 1.38
TOP2AP11388 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC23.69■■□□□ 1.38
TOP2AP11388 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC23.69■■□□□ 1.38
TOP2AP11388 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC23.69■■□□□ 1.38
TOP2AP11388 MFSD12-215ENST00000615613 688 ntBASIC23.69■■□□□ 1.38
TOP2AP11388 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TOP2AP11388 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
TOP2AP11388 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC23.69■■□□□ 1.38
TOP2AP11388 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TOP2AP11388 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms