Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FREM3P0C091 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.82□□□□□ -0.36
FREM3P0C091 AC095040.1-201ENST00000513286 675 ntBASIC12.82□□□□□ -0.36
FREM3P0C091 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FREM3P0C091 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.82□□□□□ -0.36
FREM3P0C091 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FREM3P0C091 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.82□□□□□ -0.36
FREM3P0C091 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.82□□□□□ -0.36
FREM3P0C091 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.82□□□□□ -0.36
FREM3P0C091 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.82□□□□□ -0.36
FREM3P0C091 AC005041.3-201ENST00000606287 649 ntBASIC12.82□□□□□ -0.36
FREM3P0C091 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.81□□□□□ -0.36
FREM3P0C091 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FREM3P0C091 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FREM3P0C091 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.81□□□□□ -0.36
FREM3P0C091 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.81□□□□□ -0.36
FREM3P0C091 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 HIST2H2BA-201ENST00000412169 381 ntBASIC12.81□□□□□ -0.36
FREM3P0C091 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.81□□□□□ -0.36
FREM3P0C091 DUX4L50-201ENST00000455245 715 ntBASIC12.81□□□□□ -0.36
FREM3P0C091 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
FREM3P0C091 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.81□□□□□ -0.36
FREM3P0C091 PRKXP1-201ENST00000561423 1122 ntBASIC12.81□□□□□ -0.36
FREM3P0C091 AC135983.4-201ENST00000564116 1262 ntBASIC12.81□□□□□ -0.36
FREM3P0C091 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
FREM3P0C091 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.81□□□□□ -0.36
FREM3P0C091 AL805961.1-201ENST00000642026 753 ntBASIC12.81□□□□□ -0.36
FREM3P0C091 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.81□□□□□ -0.36
FREM3P0C091 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FREM3P0C091 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
FREM3P0C091 FMO6P-201ENST00000236166 1620 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.8□□□□□ -0.36
FREM3P0C091 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 HMGA1P1-201ENST00000415560 1062 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 RPSAP31-201ENST00000416648 895 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AC130709.1-201ENST00000484779 1212 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.8□□□□□ -0.36
FREM3P0C091 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.8□□□□□ -0.36
FREM3P0C091 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.8□□□□□ -0.36
FREM3P0C091 AL021707.6-201ENST00000609212 491 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 AC073911.3-201ENST00000624401 631 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms