Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.19□□□□□ -0.62
TRGV3P03979 AL645939.5-201ENST00000606834 243 ntBASIC11.19□□□□□ -0.62
TRGV3P03979 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AL590824.1-201ENST00000403828 1349 ntBASIC11.18□□□□□ -0.62
TRGV3P03979 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TRGV3P03979 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TRGV3P03979 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 Z97180.1-201ENST00000445173 988 ntBASIC11.18□□□□□ -0.62
TRGV3P03979 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 RN7SL277P-201ENST00000481521 288 ntBASIC11.18□□□□□ -0.62
TRGV3P03979 RN7SL530P-201ENST00000485097 298 ntBASIC11.18□□□□□ -0.62
TRGV3P03979 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV3P03979 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.18□□□□□ -0.62
TRGV3P03979 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV3P03979 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms