Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MIR4754-201ENST00000582477 89 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC097724.1-201ENST00000609581 426 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC007718.1-201ENST00000621078 280 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 CU633904.3-201ENST00000624042 1029 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC089987.1-201ENST00000551654 2209 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC072061.1-201ENST00000569710 2234 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC130686.1-201ENST00000622936 2466 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 FAM90A12P-201ENST00000519497 2375 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 FAM90A24P-201ENST00000520792 2369 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 MEX3B-202ENST00000558133 4333 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RPL8P2-201ENST00000430538 502 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC026320.2-201ENST00000434379 478 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AL133466.1-201ENST00000447582 150 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 RPSAP15-201ENST00000448168 861 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC008723.1-201ENST00000506922 207 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC005740.1-201ENST00000515639 522 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC245884.6-201ENST00000515672 1067 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 CHMP4BP1-201ENST00000556017 588 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC012044.1-201ENST00000603431 297 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 AL021707.6-201ENST00000609212 491 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 AC091812.3-201ENST00000621362 345 ntBASIC10.93□□□□□ -0.66
TRBV12-3P01733 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.93□□□□□ -0.66
TRBV12-3P01733 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRBV12-3P01733 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms