Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC136475.7-201ENST00000602949 592 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 AC148476.1-201ENST00000622182 705 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TIMP1P01033 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMP1P01033 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TIMP1P01033 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 CICP14-201ENST00000629111 2732 ntBASIC14.93□□□□□ -0.02
TIMP1P01033 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMP1P01033 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 AC026271.1-201ENST00000447794 1348 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
TIMP1P01033 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.92□□□□□ -0.02
TIMP1P01033 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.92□□□□□ -0.02
TIMP1P01033 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.92□□□□□ -0.02
TIMP1P01033 CDC37P2-201ENST00000562287 1029 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.92□□□□□ -0.02
TIMP1P01033 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.92□□□□□ -0.02
TIMP1P01033 IFNL3P1-201ENST00000595082 501 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 AC087072.1-201ENST00000603727 421 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 OR3A1-202ENST00000615105 966 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 COG6-212ENST00000630730 186 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.92□□□□□ -0.02
TIMP1P01033 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TIMP1P01033 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.92□□□□□ -0.02
TIMP1P01033 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TIMP1P01033 TUBB8P4-201ENST00000511806 1324 ntBASIC14.92□□□□□ -0.02
TIMP1P01033 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 HSPA8P5-201ENST00000456928 2069 ntBASIC14.91□□□□□ -0.02
TIMP1P01033 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TIMP1P01033 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms