Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.21□□□□□ -0.14
SMAD6O43541 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.21□□□□□ -0.14
SMAD6O43541 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMAD6O43541 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SMAD6O43541 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SMAD6O43541 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.2□□□□□ -0.14
SMAD6O43541 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.2□□□□□ -0.14
SMAD6O43541 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 ODCP-201ENST00000459650 1639 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 RPL3P2-204ENST00000413027 1203 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.2□□□□□ -0.14
SMAD6O43541 AC092573.1-201ENST00000433054 884 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 AL354861.1-201ENST00000445213 355 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 RPL7P35-201ENST00000446943 740 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.2□□□□□ -0.14
SMAD6O43541 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMAD6O43541 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.2□□□□□ -0.14
SMAD6O43541 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.2□□□□□ -0.14
SMAD6O43541 CR383656.3-201ENST00000551315 183 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 KRT8P2-201ENST00000556193 944 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 AC068867.1-201ENST00000559855 150 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 DNM1P30-201ENST00000563586 452 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 AC132825.4-202ENST00000578792 434 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SMAD6O43541 AC073911.3-201ENST00000624401 631 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SMAD6O43541 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMAD6O43541 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.2□□□□□ -0.14
SMAD6O43541 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.2□□□□□ -0.14
SMAD6O43541 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMAD6O43541 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.19□□□□□ -0.14
SMAD6O43541 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
SMAD6O43541 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.19□□□□□ -0.14
SMAD6O43541 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.19□□□□□ -0.14
SMAD6O43541 NUDT4P2-201ENST00000578341 546 ntBASIC14.19□□□□□ -0.14
SMAD6O43541 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.19□□□□□ -0.14
SMAD6O43541 AP000322.3-201ENST00000608665 388 ntBASIC14.19□□□□□ -0.14
SMAD6O43541 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 IL9RP3-201ENST00000442856 1674 ntBASIC14.19□□□□□ -0.14
SMAD6O43541 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms