Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC104982.3-201ENST00000581995 514 ntBASIC11.41□□□□□ -0.58
SRRM4A7MD48 RN7SL163P-201ENST00000583100 276 ntBASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC004241.5-201ENST00000623870 2448 ntBASIC11.41□□□□□ -0.58
SRRM4A7MD48 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 DMBT1P1-203ENST00000636837 4628 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC018735.1-201ENST00000437208 1502 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC114271.1-201ENST00000612689 2813 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 ABCD1P2-201ENST00000429313 1601 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL359845.1-201ENST00000458202 1648 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 DPM3-202ENST00000368399 517 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL391647.1-201ENST00000395664 511 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC078875.1-201ENST00000431907 724 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC090164.2-201ENST00000611487 516 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC005695.3-201ENST00000614522 232 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC004623.1-201ENST00000624592 2127 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 AL445209.1-201ENST00000607269 3491 ntBASIC11.4□□□□□ -0.58
SRRM4A7MD48 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.4□□□□□ -0.58
SRRM4A7MD48 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SRRM4A7MD48 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SRRM4A7MD48 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SRRM4A7MD48 SALL4P6-201ENST00000429385 1691 ntBASIC11.4□□□□□ -0.59
SRRM4A7MD48 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SRRM4A7MD48 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms