Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 PBX2P1-201ENST00000493219 1291 ntBASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 UNC93B3-201ENST00000308076 687 ntBASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 AC106739.1-201ENST00000617035 715 ntBASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.7■□□□□ 0.9
HRH3Q9Y5N1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
HRH3Q9Y5N1 AC133561.1-201ENST00000568600 2415 ntBASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HRH3Q9Y5N1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 AC009102.2-201ENST00000606772 1639 ntBASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HRH3Q9Y5N1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 AL031432.3-201ENST00000607698 485 ntBASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.66■□□□□ 0.9
HRH3Q9Y5N1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HRH3Q9Y5N1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
HRH3Q9Y5N1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HRH3Q9Y5N1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 AL136162.1-201ENST00000607711 1078 ntBASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HRH3Q9Y5N1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 SUDS3P1-201ENST00000505831 966 ntBASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms