Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 pRNA.6-201ENST00000610482 90 ntBASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 pRNA.5-201ENST00000612139 90 ntBASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 pRNA.11-201ENST00000618423 90 ntBASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 pRNA.13-201ENST00000619112 90 ntBASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PCDHB5Q9Y5E4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB5Q9Y5E4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 AC091305.1-201ENST00000479476 895 ntBASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 AC004812.2-201ENST00000611079 2094 ntBASIC23.75■■□□□ 1.39
PCDHB5Q9Y5E4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 ZNRF2P3-201ENST00000424200 374 ntBASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 FP325331.1-202ENST00000623531 1380 ntBASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCDHB5Q9Y5E4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 AC027682.1-201ENST00000562846 899 ntBASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 AC008764.7-201ENST00000593779 1081 ntBASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB5Q9Y5E4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 RASA4CP-201ENST00000424092 1398 ntBASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB5Q9Y5E4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 AC105265.2-201ENST00000467189 838 ntBASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 CA15P2-201ENST00000611168 834 ntBASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
PCDHB5Q9Y5E4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB5Q9Y5E4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB5Q9Y5E4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB5Q9Y5E4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB5Q9Y5E4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB5Q9Y5E4 AC144652.1-201ENST00000609974 1624 ntBASIC23.7■■□□□ 1.38
PCDHB5Q9Y5E4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 DUX4L4-201ENST00000566884 1269 ntBASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB5Q9Y5E4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms