Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRCH1Q9Y2L9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRCH1Q9Y2L9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 AC092053.2-201ENST00000640557 1818 ntBASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRCH1Q9Y2L9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LRCH1Q9Y2L9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.33■■□□□ 1
LRCH1Q9Y2L9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
LRCH1Q9Y2L9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.33■■□□□ 1
LRCH1Q9Y2L9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.33■■□□□ 1
LRCH1Q9Y2L9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRCH1Q9Y2L9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 AL359504.2-201ENST00000605506 1601 ntBASIC21.31■■□□□ 1
LRCH1Q9Y2L9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRCH1Q9Y2L9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LRCH1Q9Y2L9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 AC139530.1-201ENST00000575312 1977 ntBASIC21.29■■□□□ 1
LRCH1Q9Y2L9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.29■■□□□ 1
LRCH1Q9Y2L9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRCH1Q9Y2L9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRCH1Q9Y2L9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRCH1Q9Y2L9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRCH1Q9Y2L9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms