Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
COL20A1Q9P218 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL20A1Q9P218 AC091305.1-201ENST00000479476 895 ntBASIC25.67■■□□□ 1.7
COL20A1Q9P218 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.67■■□□□ 1.7
COL20A1Q9P218 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL20A1Q9P218 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL20A1Q9P218 AC141586.4-201ENST00000624558 1573 ntBASIC25.67■■□□□ 1.7
COL20A1Q9P218 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL20A1Q9P218 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL20A1Q9P218 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.66■■□□□ 1.7
COL20A1Q9P218 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.66■■□□□ 1.7
COL20A1Q9P218 AC008764.7-201ENST00000593779 1081 ntBASIC25.66■■□□□ 1.7
COL20A1Q9P218 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL20A1Q9P218 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL20A1Q9P218 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL20A1Q9P218 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL20A1Q9P218 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 CA15P2-201ENST00000611168 834 ntBASIC25.65■■□□□ 1.7
COL20A1Q9P218 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL20A1Q9P218 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL20A1Q9P218 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL20A1Q9P218 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
COL20A1Q9P218 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL20A1Q9P218 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL20A1Q9P218 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL20A1Q9P218 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.63■■□□□ 1.69
COL20A1Q9P218 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.63■■□□□ 1.69
COL20A1Q9P218 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.63■■□□□ 1.69
COL20A1Q9P218 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.63■■□□□ 1.69
COL20A1Q9P218 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.63■■□□□ 1.69
COL20A1Q9P218 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL20A1Q9P218 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL20A1Q9P218 RASA4CP-201ENST00000424092 1398 ntBASIC25.62■■□□□ 1.69
COL20A1Q9P218 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
COL20A1Q9P218 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL20A1Q9P218 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL20A1Q9P218 AC099791.1-201ENST00000416440 715 ntBASIC25.62■■□□□ 1.69
COL20A1Q9P218 AC027682.1-201ENST00000562846 899 ntBASIC25.62■■□□□ 1.69
COL20A1Q9P218 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL20A1Q9P218 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL20A1Q9P218 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
COL20A1Q9P218 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.62■■□□□ 1.69
COL20A1Q9P218 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.61■■□□□ 1.69
COL20A1Q9P218 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.61■■□□□ 1.69
COL20A1Q9P218 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.61■■□□□ 1.69
COL20A1Q9P218 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL20A1Q9P218 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.6■■□□□ 1.69
COL20A1Q9P218 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.6■■□□□ 1.69
COL20A1Q9P218 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL20A1Q9P218 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.6■■□□□ 1.69
COL20A1Q9P218 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.59■■□□□ 1.69
COL20A1Q9P218 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
COL20A1Q9P218 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL20A1Q9P218 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL20A1Q9P218 ABCB10P4-201ENST00000566803 2184 ntBASIC25.58■■□□□ 1.69
COL20A1Q9P218 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL20A1Q9P218 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL20A1Q9P218 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
COL20A1Q9P218 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.58■■□□□ 1.69
COL20A1Q9P218 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.58■■□□□ 1.69
COL20A1Q9P218 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL20A1Q9P218 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.58■■□□□ 1.69
COL20A1Q9P218 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL20A1Q9P218 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL20A1Q9P218 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL20A1Q9P218 BX842568.3-201ENST00000418104 571 ntBASIC25.57■■□□□ 1.68
COL20A1Q9P218 AC026271.2-201ENST00000428091 497 ntBASIC25.57■■□□□ 1.68
COL20A1Q9P218 RARRES2P6-201ENST00000567333 442 ntBASIC25.57■■□□□ 1.68
COL20A1Q9P218 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.57■■□□□ 1.68
COL20A1Q9P218 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
COL20A1Q9P218 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
COL20A1Q9P218 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
COL20A1Q9P218 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL20A1Q9P218 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL20A1Q9P218 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.56■■□□□ 1.68
COL20A1Q9P218 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.56■■□□□ 1.68
COL20A1Q9P218 AC233992.3-201ENST00000607491 485 ntBASIC25.56■■□□□ 1.68
COL20A1Q9P218 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL20A1Q9P218 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
COL20A1Q9P218 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms