Protein–RNA interactions for Protein: Q9NV58

RNF19A, E3 ubiquitin-protein ligase RNF19A, humanhuman

Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19AQ9NV58 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF19AQ9NV58 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RNF19AQ9NV58 AC097381.1-201ENST00000429019 1296 ntBASIC24.53■■□□□ 1.52
RNF19AQ9NV58 AC087623.3-201ENST00000607047 1098 ntBASIC24.53■■□□□ 1.52
RNF19AQ9NV58 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF19AQ9NV58 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF19AQ9NV58 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF19AQ9NV58 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 LINC01124-201ENST00000409786 2117 ntBASIC24.52■■□□□ 1.52
RNF19AQ9NV58 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.52■■□□□ 1.52
RNF19AQ9NV58 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF19AQ9NV58 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF19AQ9NV58 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF19AQ9NV58 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF19AQ9NV58 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF19AQ9NV58 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF19AQ9NV58 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.5■■□□□ 1.51
RNF19AQ9NV58 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF19AQ9NV58 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF19AQ9NV58 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF19AQ9NV58 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF19AQ9NV58 AC233992.3-201ENST00000607491 485 ntBASIC24.49■■□□□ 1.51
RNF19AQ9NV58 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF19AQ9NV58 IRS3P-201ENST00000223076 1006 ntBASIC24.48■■□□□ 1.51
RNF19AQ9NV58 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 BX842568.3-201ENST00000418104 571 ntBASIC24.48■■□□□ 1.51
RNF19AQ9NV58 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RNF19AQ9NV58 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 AC104564.3-201ENST00000582367 638 ntBASIC24.47■■□□□ 1.51
RNF19AQ9NV58 pRNA.6-201ENST00000610482 90 ntBASIC24.47■■□□□ 1.51
RNF19AQ9NV58 pRNA.5-201ENST00000612139 90 ntBASIC24.47■■□□□ 1.51
RNF19AQ9NV58 pRNA.11-201ENST00000618423 90 ntBASIC24.47■■□□□ 1.51
RNF19AQ9NV58 pRNA.13-201ENST00000619112 90 ntBASIC24.47■■□□□ 1.51
RNF19AQ9NV58 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF19AQ9NV58 AC004812.2-201ENST00000611079 2094 ntBASIC24.46■■□□□ 1.51
RNF19AQ9NV58 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF19AQ9NV58 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF19AQ9NV58 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.46■■□□□ 1.51
RNF19AQ9NV58 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF19AQ9NV58 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
RNF19AQ9NV58 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
RNF19AQ9NV58 AL139125.2-201ENST00000623134 1869 ntBASIC24.45■■□□□ 1.51
RNF19AQ9NV58 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF19AQ9NV58 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
RNF19AQ9NV58 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF19AQ9NV58 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF19AQ9NV58 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RNF19AQ9NV58 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF19AQ9NV58 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms