Protein–RNA interactions for Protein: Q9NRW3

APOBEC3C, DNA dC->dU-editing enzyme APOBEC-3C, humanhuman

Known RBP eCLIP

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3CQ9NRW3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.46□□□□□ -1.547e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-211ENST00000505625 7306 ntTSL 1 (best)5.16□□□□□ -1.587e-8■□□□□ 10.8
APOBEC3CQ9NRW3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.92□□□□□ -1.627e-8■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFV1-210ENST00000527923 594 ntTSL 221.53■■□□□ 1.042e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.642e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-206ENST00000448973 1710 ntTSL 1 (best)25.03■■□□□ 1.62e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-210ENST00000565799 716 ntTSL 323.61■■□□□ 1.372e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.11■■□□□ 1.292e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-209ENST00000565163 485 ntTSL 320.98■□□□□ 0.952e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-213ENST00000568830 590 ntTSL 320.49■□□□□ 0.872e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-211ENST00000568077 588 ntTSL 320.49■□□□□ 0.872e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.752e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.752e-6■□□□□ 10.8
APOBEC3CQ9NRW3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.692e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-212ENST00000568773 499 ntTSL 219.31■□□□□ 0.682e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-208ENST00000564039 518 ntTSL 218.74■□□□□ 0.592e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.592e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.592e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.72■□□□□ 0.592e-6■□□□□ 10.8
APOBEC3CQ9NRW3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.572e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-207ENST00000456420 755 ntTSL 318.54■□□□□ 0.562e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.03■□□□□ 0.482e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.64■□□□□ 0.412e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.59■□□□□ 0.412e-6■□□□□ 10.8
APOBEC3CQ9NRW3 C19orf70-202ENST00000585605 586 ntTSL 317.41■□□□□ 0.382e-6■□□□□ 10.8
APOBEC3CQ9NRW3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.69■□□□□ 0.262e-6■□□□□ 10.8
APOBEC3CQ9NRW3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.59■□□□□ 0.252e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-204ENST00000601101 414 ntTSL 416.47■□□□□ 0.232e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-202ENST00000593729 569 ntTSL 216.35■□□□□ 0.212e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.182e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.172e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.142e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.12e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MRFAP1-204ENST00000512914 1982 nt15.14■□□□□ 0.012e-6■□□□□ 10.8
APOBEC3CQ9NRW3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.8□□□□□ -0.042e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.142e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-206ENST00000602059 528 ntTSL 414.13□□□□□ -0.152e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.192e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.212e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.242e-6■□□□□ 10.8
APOBEC3CQ9NRW3 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.282e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.292e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-209ENST00000634259 825 ntTSL 512.67□□□□□ -0.382e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.462e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.542e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-203ENST00000595856 553 ntTSL 511.58□□□□□ -0.562e-6■□□□□ 10.8
APOBEC3CQ9NRW3 NDUFA7-205ENST00000601258 547 ntTSL 211.3□□□□□ -0.62e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.612e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MAP4-208ENST00000429422 3724 ntTSL 1 (best)10.94□□□□□ -0.662e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-202ENST00000372792 1496 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.732e-6■□□□□ 10.8
APOBEC3CQ9NRW3 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC10.33□□□□□ -0.762e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.892e-6■□□□□ 10.8
APOBEC3CQ9NRW3 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.932e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.952e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.042e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-204ENST00000635160 692 ntTSL 48.34□□□□□ -1.072e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-210ENST00000635593 668 ntTSL 57.9□□□□□ -1.142e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-213ENST00000634538 924 ntTSL 57.9□□□□□ -1.142e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-211ENST00000560278 595 ntTSL 47.77□□□□□ -1.172e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-208ENST00000635511 920 ntTSL 57.77□□□□□ -1.172e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.222e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-205ENST00000635704 670 ntTSL 36.85□□□□□ -1.312e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-203ENST00000634318 1033 ntTSL 56.34□□□□□ -1.392e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-207ENST00000468384 503 ntTSL 1 (best)5.69□□□□□ -1.52e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-201ENST00000634251 1973 ntTSL 1 (best)5.53□□□□□ -1.522e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-202ENST00000634847 1821 ntTSL 55.47□□□□□ -1.532e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-217ENST00000461993 856 ntTSL 25.32□□□□□ -1.562e-6■□□□□ 10.8
APOBEC3CQ9NRW3 ACSM3-208ENST00000563914 771 ntTSL 55.23□□□□□ -1.572e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-212ENST00000635413 706 ntTSL 55.22□□□□□ -1.572e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-206ENST00000635605 757 ntTSL 54.86□□□□□ -1.632e-6■□□□□ 10.8
APOBEC3CQ9NRW3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.38□□□□□ -1.712e-6■□□□□ 10.8
APOBEC3CQ9NRW3 ACSM3-204ENST00000561499 527 ntTSL 44.2□□□□□ -1.742e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-214ENST00000635320 568 ntTSL 43.98□□□□□ -1.772e-6■□□□□ 10.8
APOBEC3CQ9NRW3 CAP1-218ENST00000479759 888 ntTSL 53.74□□□□□ -1.812e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.53□□□□□ -1.852e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-207ENST00000634529 372 ntTSL 42.86□□□□□ -1.952e-6■□□□□ 10.8
APOBEC3CQ9NRW3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.59□□□□□ -1.992e-6■□□□□ 10.8
APOBEC3CQ9NRW3 AC087632.1-215ENST00000558783 726 ntTSL 52.43□□□□□ -2.022e-6■□□□□ 10.8
APOBEC3CQ9NRW3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.27□□□□□ -2.052e-6■□□□□ 10.8
APOBEC3CQ9NRW3 ACSM3-214ENST00000569141 405 ntTSL 52.15□□□□□ -2.072e-6■□□□□ 10.8
APOBEC3CQ9NRW3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.09■□□□□ 0.491e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-203ENST00000420199 1002 ntTSL 316.92■□□□□ 0.31e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC13.81□□□□□ -0.21e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-207ENST00000431043 998 ntTSL 213.05□□□□□ -0.321e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.05□□□□□ -0.321e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC12.09□□□□□ -0.471e-8■□□□□ 10.7
APOBEC3CQ9NRW3 SNHG5-202ENST00000414002 430 ntTSL 210.81□□□□□ -0.681e-8■□□□□ 10.7
APOBEC3CQ9NRW3 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.145e-8■□□□□ 10.7
APOBEC3CQ9NRW3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.565e-8■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.294e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.87□□□□□ -0.034e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-208ENST00000474249 1333 ntTSL 514.77□□□□□ -0.044e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.054e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-206ENST00000466525 1720 ntTSL 514.12□□□□□ -0.154e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.184e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.29□□□□□ -0.284e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC12.05□□□□□ -0.484e-25■□□□□ 10.7
APOBEC3CQ9NRW3 GAPDH-207ENST00000466588 1363 ntTSL 512.04□□□□□ -0.484e-25■□□□□ 10.7
APOBEC3CQ9NRW3 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC13.05□□□□□ -0.324e-19■□□□□ 10.7
Retrieved 100 of 4,302 protein–RNA pairs in 190.4 ms