RNA–Protein interactions for RNA: ENST00000561499.1

ACSM3-204, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 527 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-204ENST00000561499 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
ACSM3-204ENST00000561499 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
ACSM3-204ENST00000561499 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
ACSM3-204ENST00000561499 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
ACSM3-204ENST00000561499 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
ACSM3-204ENST00000561499 FOXD1Q16676 465 aa16.96■□□□□ 0.31
ACSM3-204ENST00000561499 MSH5O43196 834 aa16.1■□□□□ 0.17
ACSM3-204ENST00000561499 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
ACSM3-204ENST00000561499 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
ACSM3-204ENST00000561499 ADRA2BP18089 450 aa15.01□□□□□ -0.01
ACSM3-204ENST00000561499 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
ACSM3-204ENST00000561499 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
ACSM3-204ENST00000561499 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
ACSM3-204ENST00000561499 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
ACSM3-204ENST00000561499 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
ACSM3-204ENST00000561499 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
ACSM3-204ENST00000561499 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
ACSM3-204ENST00000561499 POTEHQ6S545 545 aa13.48□□□□□ -0.25
ACSM3-204ENST00000561499 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
ACSM3-204ENST00000561499 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
ACSM3-204ENST00000561499 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
ACSM3-204ENST00000561499 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
ACSM3-204ENST00000561499 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
ACSM3-204ENST00000561499 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
ACSM3-204ENST00000561499 DSG3P32926 999 aa12.55□□□□□ -0.4
ACSM3-204ENST00000561499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.41
ACSM3-204ENST00000561499 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
ACSM3-204ENST00000561499 CAPN15O75808 1086 aa12.3□□□□□ -0.44
ACSM3-204ENST00000561499 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
ACSM3-204ENST00000561499 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
ACSM3-204ENST00000561499 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
ACSM3-204ENST00000561499 ABCB7O75027 752 aa12.02□□□□□ -0.49
ACSM3-204ENST00000561499 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
ACSM3-204ENST00000561499 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
ACSM3-204ENST00000561499 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
ACSM3-204ENST00000561499 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
ACSM3-204ENST00000561499 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
ACSM3-204ENST00000561499 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
ACSM3-204ENST00000561499 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
ACSM3-204ENST00000561499 HAX1O00165 279 aa11.58□□□□□ -0.56
ACSM3-204ENST00000561499 EVX2Q03828 476 aa11.56□□□□□ -0.56
ACSM3-204ENST00000561499 APLP2Q06481 763 aa11.56□□□□□ -0.56
ACSM3-204ENST00000561499 KCNA4P22459 653 aa11.53□□□□□ -0.56
ACSM3-204ENST00000561499 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
ACSM3-204ENST00000561499 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
ACSM3-204ENST00000561499 LHX8Q68G74 356 aa11.39□□□□□ -0.59
ACSM3-204ENST00000561499 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
ACSM3-204ENST00000561499 REM2Q8IYK8 340 aaPredicted RBP11.38□□□□□ -0.59
ACSM3-204ENST00000561499 POLA2Q14181 598 aa11.37□□□□□ -0.59
ACSM3-204ENST00000561499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
ACSM3-204ENST00000561499 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
ACSM3-204ENST00000561499 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
ACSM3-204ENST00000561499 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
ACSM3-204ENST00000561499 GABBR2O75899 941 aa11.13□□□□□ -0.63
ACSM3-204ENST00000561499 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
ACSM3-204ENST00000561499 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
ACSM3-204ENST00000561499 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
ACSM3-204ENST00000561499 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
ACSM3-204ENST00000561499 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
ACSM3-204ENST00000561499 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
ACSM3-204ENST00000561499 MYCNP04198 464 aaPredicted RBP10.87□□□□□ -0.67
ACSM3-204ENST00000561499 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
ACSM3-204ENST00000561499 POTEMA6NI47 508 aa10.79□□□□□ -0.68
ACSM3-204ENST00000561499 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
ACSM3-204ENST00000561499 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
ACSM3-204ENST00000561499 OTUD5Q96G74 571 aa10.71□□□□□ -0.69
ACSM3-204ENST00000561499 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
ACSM3-204ENST00000561499 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
ACSM3-204ENST00000561499 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
ACSM3-204ENST00000561499 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
ACSM3-204ENST00000561499 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
ACSM3-204ENST00000561499 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
ACSM3-204ENST00000561499 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
ACSM3-204ENST00000561499 ZBTB22O15209 634 aa10.55□□□□□ -0.72
ACSM3-204ENST00000561499 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
ACSM3-204ENST00000561499 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
ACSM3-204ENST00000561499 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
ACSM3-204ENST00000561499 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
ACSM3-204ENST00000561499 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
ACSM3-204ENST00000561499 EHMT2Q96KQ7 1210 aa10.44□□□□□ -0.74
ACSM3-204ENST00000561499 CLCN6P51797 869 aa10.43□□□□□ -0.74
ACSM3-204ENST00000561499 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
ACSM3-204ENST00000561499 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
ACSM3-204ENST00000561499 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
ACSM3-204ENST00000561499 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
ACSM3-204ENST00000561499 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
ACSM3-204ENST00000561499 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
ACSM3-204ENST00000561499 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
ACSM3-204ENST00000561499 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
ACSM3-204ENST00000561499 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
ACSM3-204ENST00000561499 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
ACSM3-204ENST00000561499 FBLN2P98095 1184 aa10.27□□□□□ -0.77
ACSM3-204ENST00000561499 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
ACSM3-204ENST00000561499 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
ACSM3-204ENST00000561499 PABPN1Q86U42 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
ACSM3-204ENST00000561499 CDAN1Q8IWY9 1227 aa10.11□□□□□ -0.79
ACSM3-204ENST00000561499 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
ACSM3-204ENST00000561499 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
ACSM3-204ENST00000561499 MAMSTRQ6ZN01 415 aa10.04□□□□□ -0.8
ACSM3-204ENST00000561499 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms