RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 DCAF8L2P0C7V8 631 aa9.52□□□□□ -0.89
MATR3-211ENST00000505625 EHMT2Q96KQ7 1210 aa8.8□□□□□ -1
MATR3-211ENST00000505625 CHIC1Q5VXU3 224 aa8.51□□□□□ -1.05
MATR3-211ENST00000505625 FAM9AQ8IZU1 332 aaPredicted RBP8.51□□□□□ -1.05
MATR3-211ENST00000505625 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
MATR3-211ENST00000505625 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
MATR3-211ENST00000505625 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
MATR3-211ENST00000505625 TTBK1Q5TCY1 1321 aaPredicted RBP8.42□□□□□ -1.06
MATR3-211ENST00000505625 SUPT5HO00267 1087 aaKnown RBP8.29□□□□□ -1.08
MATR3-211ENST00000505625 APLP2Q06481 763 aa8.23□□□□□ -1.09
MATR3-211ENST00000505625 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
MATR3-211ENST00000505625 PLPPR3Q6T4P5 718 aa8.17□□□□□ -1.1
MATR3-211ENST00000505625 SLC4A1APQ9BWU0 796 aaKnown RBP8.15□□□□□ -1.1
MATR3-211ENST00000505625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.08□□□□□ -1.12
MATR3-211ENST00000505625 HNRNPUL2Q1KMD3 747 aaKnown RBP8.08□□□□□ -1.12
MATR3-211ENST00000505625 PELP1Q8IZL8 1130 aaKnown RBP8.04□□□□□ -1.12
MATR3-211ENST00000505625 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
MATR3-211ENST00000505625 POLR3GLQ9BT43 218 aa8.02□□□□□ -1.13
MATR3-211ENST00000505625 CNGB1Q14028 1251 aaPredicted RBP8.02□□□□□ -1.13
MATR3-211ENST00000505625 BCANQ96GW7 911 aa7.98□□□□□ -1.13
MATR3-211ENST00000505625 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
MATR3-211ENST00000505625 BCL11AQ9H165 835 aa7.89□□□□□ -1.15
MATR3-211ENST00000505625 A0A0G2JS52 829 aa7.88□□□□□ -1.15
MATR3-211ENST00000505625 NISCHQ9Y2I1 1504 aa7.86□□□□□ -1.15
MATR3-211ENST00000505625 SENP3Q9H4L4 574 aaPredicted RBP7.86□□□□□ -1.15
MATR3-211ENST00000505625 MYT1Q01538 1121 aa7.86□□□□□ -1.15
MATR3-211ENST00000505625 SCAF1Q9H7N4 1312 aaKnown RBP7.83□□□□□ -1.16
MATR3-211ENST00000505625 PLEKHG5O94827 1062 aa7.8□□□□□ -1.16
MATR3-211ENST00000505625 FBLN2P98095 1184 aa7.79□□□□□ -1.16
MATR3-211ENST00000505625 ITGAEP38570 1179 aa7.77□□□□□ -1.17
MATR3-211ENST00000505625 UBTFP17480 764 aaKnown RBP7.76□□□□□ -1.17
MATR3-211ENST00000505625 PCGF6Q9BYE7 350 aa7.75□□□□□ -1.17
MATR3-211ENST00000505625 CCER1Q8TC90 406 aaPredicted RBP7.68□□□□□ -1.18
MATR3-211ENST00000505625 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
MATR3-211ENST00000505625 PPARGC1BQ86YN6 1023 aaKnown RBP7.68□□□□□ -1.18
MATR3-211ENST00000505625 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
MATR3-211ENST00000505625 YTHDC1Q96MU7 727 aaKnown RBP7.64□□□□□ -1.19
MATR3-211ENST00000505625 ZBTB7CA1YPR0 619 aa7.63□□□□□ -1.19
MATR3-211ENST00000505625 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
MATR3-211ENST00000505625 NCBP3Q53F19 620 aaKnown RBP7.62□□□□□ -1.19
MATR3-211ENST00000505625 AEBP2Q6ZN18 517 aaPredicted RBP7.6□□□□□ -1.19
MATR3-211ENST00000505625 CLSPNQ9HAW4 1339 aa7.59□□□□□ -1.2
MATR3-211ENST00000505625 STAG3Q9UJ98 1225 aa7.58□□□□□ -1.2
MATR3-211ENST00000505625 NEFLP07196 543 aa7.56□□□□□ -1.2
MATR3-211ENST00000505625 ARID3CA6NKF2 412 aa7.56□□□□□ -1.2
MATR3-211ENST00000505625 TRHP20396 242 aaPredicted RBP7.55□□□□□ -1.2
MATR3-211ENST00000505625 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
MATR3-211ENST00000505625 ZBTB47Q9UFB7 747 aaPredicted RBP7.53□□□□□ -1.2
MATR3-211ENST00000505625 TRIM41Q8WV44 630 aa7.52□□□□□ -1.21
MATR3-211ENST00000505625 ZNF326Q5BKZ1 582 aaKnown RBP7.5□□□□□ -1.21
MATR3-211ENST00000505625 C14orf37Q86TY3 774 aa7.5□□□□□ -1.21
MATR3-211ENST00000505625 CHGAP10645 457 aaKnown RBP7.49□□□□□ -1.21
MATR3-211ENST00000505625 ARXQ96QS3 562 aa7.49□□□□□ -1.21
MATR3-211ENST00000505625 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
MATR3-211ENST00000505625 NPHP1O15259 732 aa7.47□□□□□ -1.21
MATR3-211ENST00000505625 ZNF316A6NFI3 1004 aaPredicted RBP7.46□□□□□ -1.21
MATR3-211ENST00000505625 PABPN1Q86U42 306 aaKnown RBP eCLIP7.46□□□□□ -1.212e-7■■□□□ 12.6
MATR3-211ENST00000505625 ARID4BQ4LE39 1312 aaPredicted RBP7.45□□□□□ -1.22
MATR3-211ENST00000505625 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.45□□□□□ -1.22
MATR3-211ENST00000505625 PHF23Q9BUL5 403 aaPredicted RBP7.43□□□□□ -1.22
MATR3-211ENST00000505625 FAM50AQ14320 339 aaKnown RBP7.43□□□□□ -1.22
MATR3-211ENST00000505625 NPM1P06748 294 aaKnown RBP eCLIP7.41□□□□□ -1.22
MATR3-211ENST00000505625 NEFMP07197 916 aa7.41□□□□□ -1.22
MATR3-211ENST00000505625 CANXP27824 592 aaKnown RBP7.39□□□□□ -1.23
MATR3-211ENST00000505625 ABCC9O60706 1549 aa7.39□□□□□ -1.23
MATR3-211ENST00000505625 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
MATR3-211ENST00000505625 NPM2Q86SE8 214 aaKnown RBP7.37□□□□□ -1.23
MATR3-211ENST00000505625 KRI1Q8N9T8 703 aaKnown RBP7.35□□□□□ -1.23
MATR3-211ENST00000505625 TAOK2Q9UL54 1235 aa7.33□□□□□ -1.24
MATR3-211ENST00000505625 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
MATR3-211ENST00000505625 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
MATR3-211ENST00000505625 CDK11BP21127 795 aaKnown RBP7.32□□□□□ -1.24
MATR3-211ENST00000505625 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
MATR3-211ENST00000505625 CENPBP07199 599 aaPredicted RBP7.3□□□□□ -1.24
MATR3-211ENST00000505625 CLSTN1O94985 981 aa7.29□□□□□ -1.24
MATR3-211ENST00000505625 P3H3Q8IVL6 736 aa7.28□□□□□ -1.24
MATR3-211ENST00000505625 PRM3Q9NNZ6 103 aa7.27□□□□□ -1.25
MATR3-211ENST00000505625 DCAF8L1A6NGE4 600 aa7.26□□□□□ -1.25
MATR3-211ENST00000505625 KLHL34Q8N239 644 aa7.26□□□□□ -1.25
MATR3-211ENST00000505625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.26□□□□□ -1.253e-7■■■□□ 18.1
MATR3-211ENST00000505625 CCDC9Q9Y3X0 531 aaKnown RBP7.26□□□□□ -1.25
MATR3-211ENST00000505625 AMER1Q5JTC6 1135 aaPredicted RBP7.23□□□□□ -1.25
MATR3-211ENST00000505625 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
MATR3-211ENST00000505625 ISY1Q9ULR0 285 aaKnown RBP7.22□□□□□ -1.25
MATR3-211ENST00000505625 MEX3CQ5U5Q3 659 aaKnown RBP7.2□□□□□ -1.26
MATR3-211ENST00000505625 MLECQ14165 292 aa7.17□□□□□ -1.26
MATR3-211ENST00000505625 ANO8Q9HCE9 1232 aaPredicted RBP7.17□□□□□ -1.26
MATR3-211ENST00000505625 TPRNQ4KMQ1 711 aa7.17□□□□□ -1.26
MATR3-211ENST00000505625 KCNH8Q96L42 1107 aa7.15□□□□□ -1.26
MATR3-211ENST00000505625 MSH5O43196 834 aa7.14□□□□□ -1.27
MATR3-211ENST00000505625 SALL2Q9Y467 1007 aaPredicted RBP7.12□□□□□ -1.27
MATR3-211ENST00000505625 GOLGA2Q08379 1002 aa7.12□□□□□ -1.27
MATR3-211ENST00000505625 HSP90AA1P07900 732 aaKnown RBP7.12□□□□□ -1.27
MATR3-211ENST00000505625 TRIM26Q12899 539 aaPredicted RBP7.12□□□□□ -1.27
MATR3-211ENST00000505625 NBR1Q14596 966 aa7.1□□□□□ -1.27
MATR3-211ENST00000505625 RTL5Q5HYW3 569 aaPredicted RBP7.1□□□□□ -1.27
MATR3-211ENST00000505625 PPM1GO15355 546 aaPredicted RBP7.1□□□□□ -1.27
MATR3-211ENST00000505625 G3V3G9 751 aa7.1□□□□□ -1.27
MATR3-211ENST00000505625 DCAF8Q5TAQ9 597 aa7.1□□□□□ -1.27
MATR3-211ENST00000505625 TMX4Q9H1E5 349 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms