RNA–Protein interactions for RNA: ENST00000461993.1

CAP1-217, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 2

Gene CAP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-217ENST00000461993 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
CAP1-217ENST00000461993 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
CAP1-217ENST00000461993 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
CAP1-217ENST00000461993 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CAP1-217ENST00000461993 FOXD1Q16676 465 aa15.92■□□□□ 0.14
CAP1-217ENST00000461993 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
CAP1-217ENST00000461993 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
CAP1-217ENST00000461993 ADRA2BP18089 450 aa15.17■□□□□ 0.02
CAP1-217ENST00000461993 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
CAP1-217ENST00000461993 MSH5O43196 834 aa14.69□□□□□ -0.06
CAP1-217ENST00000461993 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
CAP1-217ENST00000461993 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
CAP1-217ENST00000461993 POTEDQ86YR6 584 aa13.79□□□□□ -0.2
CAP1-217ENST00000461993 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
CAP1-217ENST00000461993 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
CAP1-217ENST00000461993 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
CAP1-217ENST00000461993 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
CAP1-217ENST00000461993 KCNA4P22459 653 aa13.32□□□□□ -0.28
CAP1-217ENST00000461993 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
CAP1-217ENST00000461993 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
CAP1-217ENST00000461993 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
CAP1-217ENST00000461993 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
CAP1-217ENST00000461993 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
CAP1-217ENST00000461993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.39
CAP1-217ENST00000461993 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
CAP1-217ENST00000461993 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
CAP1-217ENST00000461993 NISCHQ9Y2I1 1504 aa12.55□□□□□ -0.4
CAP1-217ENST00000461993 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
CAP1-217ENST00000461993 ABCC9O60706 1549 aa12.53□□□□□ -0.4
CAP1-217ENST00000461993 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CAP1-217ENST00000461993 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
CAP1-217ENST00000461993 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
CAP1-217ENST00000461993 ZBTB22O15209 634 aa12.27□□□□□ -0.45
CAP1-217ENST00000461993 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
CAP1-217ENST00000461993 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
CAP1-217ENST00000461993 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
CAP1-217ENST00000461993 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CAP1-217ENST00000461993 CAPN15O75808 1086 aa12.12□□□□□ -0.47
CAP1-217ENST00000461993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
CAP1-217ENST00000461993 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
CAP1-217ENST00000461993 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
CAP1-217ENST00000461993 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
CAP1-217ENST00000461993 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
CAP1-217ENST00000461993 APLP2Q06481 763 aa12.01□□□□□ -0.49
CAP1-217ENST00000461993 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
CAP1-217ENST00000461993 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
CAP1-217ENST00000461993 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
CAP1-217ENST00000461993 DSG3P32926 999 aa11.93□□□□□ -0.5
CAP1-217ENST00000461993 ABCB7O75027 752 aa11.91□□□□□ -0.5
CAP1-217ENST00000461993 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
CAP1-217ENST00000461993 POLA2Q14181 598 aa11.76□□□□□ -0.53
CAP1-217ENST00000461993 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
CAP1-217ENST00000461993 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
CAP1-217ENST00000461993 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
CAP1-217ENST00000461993 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
CAP1-217ENST00000461993 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
CAP1-217ENST00000461993 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
CAP1-217ENST00000461993 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
CAP1-217ENST00000461993 FBLN2P98095 1184 aa11.38□□□□□ -0.59
CAP1-217ENST00000461993 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
CAP1-217ENST00000461993 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
CAP1-217ENST00000461993 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
CAP1-217ENST00000461993 NACADO15069 1562 aa11.27□□□□□ -0.61
CAP1-217ENST00000461993 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
CAP1-217ENST00000461993 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
CAP1-217ENST00000461993 CUX2O14529 1486 aa11.23□□□□□ -0.61
CAP1-217ENST00000461993 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
CAP1-217ENST00000461993 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
CAP1-217ENST00000461993 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
CAP1-217ENST00000461993 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
CAP1-217ENST00000461993 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
CAP1-217ENST00000461993 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
CAP1-217ENST00000461993 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
CAP1-217ENST00000461993 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
CAP1-217ENST00000461993 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
CAP1-217ENST00000461993 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
CAP1-217ENST00000461993 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
CAP1-217ENST00000461993 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
CAP1-217ENST00000461993 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
CAP1-217ENST00000461993 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
CAP1-217ENST00000461993 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
CAP1-217ENST00000461993 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
CAP1-217ENST00000461993 FKBP8Q14318 412 aa10.88□□□□□ -0.67
CAP1-217ENST00000461993 POTEHQ6S545 545 aa10.87□□□□□ -0.67
CAP1-217ENST00000461993 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
CAP1-217ENST00000461993 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
CAP1-217ENST00000461993 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.684e-8■■■□□ 17.3
CAP1-217ENST00000461993 PROM2Q8N271 834 aa10.77□□□□□ -0.69
CAP1-217ENST00000461993 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
CAP1-217ENST00000461993 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
CAP1-217ENST00000461993 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
CAP1-217ENST00000461993 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
CAP1-217ENST00000461993 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
CAP1-217ENST00000461993 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
CAP1-217ENST00000461993 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
CAP1-217ENST00000461993 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
CAP1-217ENST00000461993 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.72
CAP1-217ENST00000461993 HAX1O00165 279 aa10.52□□□□□ -0.73
CAP1-217ENST00000461993 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
CAP1-217ENST00000461993 RIMBP3CA6NJZ7 1639 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms