Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB16Q9NRJ7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB16Q9NRJ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB16Q9NRJ7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB16Q9NRJ7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB16Q9NRJ7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB16Q9NRJ7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 KRT18P60-201ENST00000312876 1297 ntBASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB16Q9NRJ7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 AC074183.2-201ENST00000623112 922 ntBASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB16Q9NRJ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 ALDH1A3-203ENST00000557963 1670 ntBASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB16Q9NRJ7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB16Q9NRJ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 AC012354.3-201ENST00000623734 483 ntBASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB16Q9NRJ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB16Q9NRJ7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB16Q9NRJ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 BHLHE23-202ENST00000612929 1109 ntBASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB16Q9NRJ7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 C1orf229-201ENST00000623686 2258 ntBASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB16Q9NRJ7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms