Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 AC092028.1-203ENST00000608262 953 ntBASIC20.84■□□□□ 0.93
POLE3Q9NRF9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
POLE3Q9NRF9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.83■□□□□ 0.93
POLE3Q9NRF9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.83■□□□□ 0.93
POLE3Q9NRF9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
POLE3Q9NRF9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
POLE3Q9NRF9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
POLE3Q9NRF9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
POLE3Q9NRF9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 AC068473.5-201ENST00000616428 2072 ntBASIC20.81■□□□□ 0.92
POLE3Q9NRF9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
POLE3Q9NRF9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.8■□□□□ 0.92
POLE3Q9NRF9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLE3Q9NRF9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 MIR4787-201ENST00000607364 84 ntBASIC20.79■□□□□ 0.92
POLE3Q9NRF9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLE3Q9NRF9 AC079630.1-202ENST00000618127 1840 ntBASIC20.78■□□□□ 0.92
POLE3Q9NRF9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 AC009299.2-201ENST00000482477 511 ntBASIC20.78■□□□□ 0.92
POLE3Q9NRF9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLE3Q9NRF9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLE3Q9NRF9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
POLE3Q9NRF9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms