Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.02■□□□□ 0.96
KLHL1Q9NR64 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KLHL1Q9NR64 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 PBX2P1-201ENST00000493219 1291 ntBASIC21.01■□□□□ 0.95
KLHL1Q9NR64 AC005837.3-201ENST00000612163 286 ntBASIC21.01■□□□□ 0.95
KLHL1Q9NR64 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL1Q9NR64 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL1Q9NR64 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHL1Q9NR64 AL022069.1-201ENST00000568025 1636 ntBASIC21■□□□□ 0.95
KLHL1Q9NR64 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21■□□□□ 0.95
KLHL1Q9NR64 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KLHL1Q9NR64 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21■□□□□ 0.95
KLHL1Q9NR64 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL1Q9NR64 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
KLHL1Q9NR64 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KLHL1Q9NR64 AC141586.4-201ENST00000624558 1573 ntBASIC21■□□□□ 0.95
KLHL1Q9NR64 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21■□□□□ 0.95
KLHL1Q9NR64 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL1Q9NR64 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL1Q9NR64 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 UNC93B3-201ENST00000308076 687 ntBASIC20.99■□□□□ 0.95
KLHL1Q9NR64 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 HLA-L-211ENST00000482052 1765 ntBASIC20.99■□□□□ 0.95
KLHL1Q9NR64 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL1Q9NR64 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL1Q9NR64 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
KLHL1Q9NR64 AC004812.2-201ENST00000611079 2094 ntBASIC20.97■□□□□ 0.95
KLHL1Q9NR64 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KLHL1Q9NR64 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
KLHL1Q9NR64 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
KLHL1Q9NR64 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 AL136162.1-201ENST00000607711 1078 ntBASIC20.95■□□□□ 0.94
KLHL1Q9NR64 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHL1Q9NR64 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 AC106739.1-201ENST00000617035 715 ntBASIC20.94■□□□□ 0.94
KLHL1Q9NR64 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KLHL1Q9NR64 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KLHL1Q9NR64 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms