Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
LRRC40Q9H9A6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC40Q9H9A6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.85■■□□□ 1.25
LRRC40Q9H9A6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC40Q9H9A6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 AC092028.1-203ENST00000608262 953 ntBASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRC40Q9H9A6 AC005703.6-201ENST00000623265 1329 ntBASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 AC079630.1-202ENST00000618127 1840 ntBASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC40Q9H9A6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
LRRC40Q9H9A6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRRC40Q9H9A6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC40Q9H9A6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 AC009299.2-201ENST00000482477 511 ntBASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 MIR4787-201ENST00000607364 84 ntBASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC40Q9H9A6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 AL451085.2-201ENST00000605085 799 ntBASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
LRRC40Q9H9A6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 AC239859.2-201ENST00000444165 318 ntBASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.79■■□□□ 1.24
LRRC40Q9H9A6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRC40Q9H9A6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRC40Q9H9A6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.78■■□□□ 1.24
LRRC40Q9H9A6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
LRRC40Q9H9A6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.23
LRRC40Q9H9A6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
LRRC40Q9H9A6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 MTDHP2-201ENST00000601468 714 ntBASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRC40Q9H9A6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LRRC40Q9H9A6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRC40Q9H9A6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.74■■□□□ 1.23
LRRC40Q9H9A6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms