Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC33.2■■■□□ 2.91
SCAF1Q9H7N4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC33.2■■■□□ 2.9
SCAF1Q9H7N4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
SCAF1Q9H7N4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC33.2■■■□□ 2.9
SCAF1Q9H7N4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
SCAF1Q9H7N4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 HLA-L-209ENST00000420110 1011 ntBASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 C9orf163-202ENST00000624034 2573 ntBASIC33.19■■■□□ 2.9
SCAF1Q9H7N4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 AC011551.1-201ENST00000614101 683 ntBASIC33.18■■■□□ 2.9
SCAF1Q9H7N4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC33.17■■■□□ 2.9
SCAF1Q9H7N4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
SCAF1Q9H7N4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 LINC00565-201ENST00000562710 2331 ntBASIC33.16■■■□□ 2.9
SCAF1Q9H7N4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SCAF1Q9H7N4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC33.14■■■□□ 2.9
SCAF1Q9H7N4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 DUX4L19-201ENST00000557448 1267 ntBASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 AC097639.1-201ENST00000565519 1891 ntBASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC33.13■■■□□ 2.89
SCAF1Q9H7N4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 AC027682.1-201ENST00000562846 899 ntBASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 AC008764.7-201ENST00000593779 1081 ntBASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCAF1Q9H7N4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SCAF1Q9H7N4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SCAF1Q9H7N4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SCAF1Q9H7N4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.11■■■□□ 2.89
SCAF1Q9H7N4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC33.11■■■□□ 2.89
SCAF1Q9H7N4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC33.1■■■□□ 2.89
SCAF1Q9H7N4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 DUSP8P5-201ENST00000422884 1815 ntBASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC33.09■■■□□ 2.89
SCAF1Q9H7N4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC33.08■■■□□ 2.89
SCAF1Q9H7N4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
SCAF1Q9H7N4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC33.08■■■□□ 2.89
SCAF1Q9H7N4 AF131216.4-201ENST00000638924 1588 ntBASIC33.08■■■□□ 2.89
SCAF1Q9H7N4 SYT6-210ENST00000641643 1587 ntBASIC33.08■■■□□ 2.89
SCAF1Q9H7N4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
SCAF1Q9H7N4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms