Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDH23Q9H251 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.29■■□□□ 1.48
CDH23Q9H251 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.29■■□□□ 1.48
CDH23Q9H251 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.28■■□□□ 1.48
CDH23Q9H251 AP005435.1-201ENST00000529293 1178 ntBASIC24.28■■□□□ 1.48
CDH23Q9H251 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.28■■□□□ 1.48
CDH23Q9H251 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.28■■□□□ 1.48
CDH23Q9H251 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.28■■□□□ 1.48
CDH23Q9H251 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.28■■□□□ 1.48
CDH23Q9H251 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDH23Q9H251 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDH23Q9H251 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.28■■□□□ 1.48
CDH23Q9H251 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDH23Q9H251 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDH23Q9H251 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDH23Q9H251 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.27■■□□□ 1.48
CDH23Q9H251 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.27■■□□□ 1.48
CDH23Q9H251 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDH23Q9H251 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CDH23Q9H251 AC008687.6-201ENST00000596318 630 ntBASIC24.26■■□□□ 1.47
CDH23Q9H251 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 AC006970.2-201ENST00000450065 779 ntBASIC24.26■■□□□ 1.47
CDH23Q9H251 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.26■■□□□ 1.47
CDH23Q9H251 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDH23Q9H251 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CDH23Q9H251 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CDH23Q9H251 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
CDH23Q9H251 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CDH23Q9H251 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.25■■□□□ 1.47
CDH23Q9H251 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDH23Q9H251 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDH23Q9H251 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDH23Q9H251 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.24■■□□□ 1.47
CDH23Q9H251 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDH23Q9H251 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDH23Q9H251 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.24■■□□□ 1.47
CDH23Q9H251 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CDH23Q9H251 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.24■■□□□ 1.47
CDH23Q9H251 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.24■■□□□ 1.47
CDH23Q9H251 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.24■■□□□ 1.47
CDH23Q9H251 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDH23Q9H251 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDH23Q9H251 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.23■■□□□ 1.47
CDH23Q9H251 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDH23Q9H251 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.23■■□□□ 1.47
CDH23Q9H251 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
CDH23Q9H251 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDH23Q9H251 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CDH23Q9H251 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDH23Q9H251 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.22■■□□□ 1.47
CDH23Q9H251 AC137761.2-201ENST00000561729 223 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 AC145350.3-201ENST00000569033 163 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
CDH23Q9H251 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CDH23Q9H251 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDH23Q9H251 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.22■■□□□ 1.47
CDH23Q9H251 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDH23Q9H251 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDH23Q9H251 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.22■■□□□ 1.47
CDH23Q9H251 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDH23Q9H251 pRNA.6-201ENST00000610482 90 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 pRNA.5-201ENST00000612139 90 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 pRNA.11-201ENST00000618423 90 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 pRNA.13-201ENST00000619112 90 ntBASIC24.22■■□□□ 1.47
CDH23Q9H251 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.21■■□□□ 1.47
CDH23Q9H251 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.21■■□□□ 1.47
CDH23Q9H251 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.21■■□□□ 1.47
CDH23Q9H251 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDH23Q9H251 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.2■■□□□ 1.47
CDH23Q9H251 SLC6A10P-202ENST00000431994 2058 ntBASIC24.2■■□□□ 1.47
CDH23Q9H251 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDH23Q9H251 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDH23Q9H251 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.2■■□□□ 1.46
CDH23Q9H251 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDH23Q9H251 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDH23Q9H251 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.2■■□□□ 1.46
CDH23Q9H251 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CDH23Q9H251 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDH23Q9H251 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CDH23Q9H251 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.19■■□□□ 1.46
CDH23Q9H251 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.19■■□□□ 1.46
CDH23Q9H251 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.19■■□□□ 1.46
CDH23Q9H251 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CDH23Q9H251 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDH23Q9H251 AC009086.3-201ENST00000623486 1008 ntBASIC24.19■■□□□ 1.46
CDH23Q9H251 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms