Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 AC105265.2-201ENST00000467189 838 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 pRNA.6-201ENST00000610482 90 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 pRNA.5-201ENST00000612139 90 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 pRNA.11-201ENST00000618423 90 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 pRNA.13-201ENST00000619112 90 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 AC004812.2-201ENST00000611079 2094 ntBASIC23.43■■□□□ 1.34
RNF38Q9H0F5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF38Q9H0F5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 AC091305.1-201ENST00000479476 895 ntBASIC23.42■■□□□ 1.34
RNF38Q9H0F5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 AC008764.7-201ENST00000593779 1081 ntBASIC23.42■■□□□ 1.34
RNF38Q9H0F5 AC141586.4-201ENST00000624558 1573 ntBASIC23.42■■□□□ 1.34
RNF38Q9H0F5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RNF38Q9H0F5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF38Q9H0F5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 CA15P2-201ENST00000611168 834 ntBASIC23.4■■□□□ 1.34
RNF38Q9H0F5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 RASA4CP-201ENST00000424092 1398 ntBASIC23.4■■□□□ 1.34
RNF38Q9H0F5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RNF38Q9H0F5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RNF38Q9H0F5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF38Q9H0F5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
RNF38Q9H0F5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF38Q9H0F5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF38Q9H0F5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 AC099791.1-201ENST00000416440 715 ntBASIC23.37■■□□□ 1.33
RNF38Q9H0F5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
RNF38Q9H0F5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 AC027682.1-201ENST00000562846 899 ntBASIC23.36■■□□□ 1.33
RNF38Q9H0F5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF38Q9H0F5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF38Q9H0F5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms