Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS4Q9BT78 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
COPS4Q9BT78 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS4Q9BT78 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS4Q9BT78 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COPS4Q9BT78 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS4Q9BT78 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS4Q9BT78 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS4Q9BT78 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS4Q9BT78 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS4Q9BT78 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COPS4Q9BT78 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS4Q9BT78 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS4Q9BT78 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.52■□□□□ 0.88
COPS4Q9BT78 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.52■□□□□ 0.88
COPS4Q9BT78 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS4Q9BT78 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COPS4Q9BT78 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.52■□□□□ 0.88
COPS4Q9BT78 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
COPS4Q9BT78 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
COPS4Q9BT78 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COPS4Q9BT78 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 AL137060.1-201ENST00000618151 2648 ntBASIC20.51■□□□□ 0.87
COPS4Q9BT78 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 RPS2P7-201ENST00000447334 885 ntBASIC20.51■□□□□ 0.87
COPS4Q9BT78 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 AL161729.1-201ENST00000604104 1402 ntBASIC20.51■□□□□ 0.87
COPS4Q9BT78 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.51■□□□□ 0.87
COPS4Q9BT78 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS4Q9BT78 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS4Q9BT78 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COPS4Q9BT78 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.5■□□□□ 0.87
COPS4Q9BT78 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS4Q9BT78 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
COPS4Q9BT78 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COPS4Q9BT78 SPCS2P3-201ENST00000500401 656 ntBASIC20.5■□□□□ 0.87
COPS4Q9BT78 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COPS4Q9BT78 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
COPS4Q9BT78 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
COPS4Q9BT78 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 MIR6765-201ENST00000614092 87 ntBASIC20.49■□□□□ 0.87
COPS4Q9BT78 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.49■□□□□ 0.87
COPS4Q9BT78 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS4Q9BT78 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 ESRRAP2-201ENST00000418437 1549 ntBASIC20.48■□□□□ 0.87
COPS4Q9BT78 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS4Q9BT78 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS4Q9BT78 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS4Q9BT78 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS4Q9BT78 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COPS4Q9BT78 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
COPS4Q9BT78 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPS4Q9BT78 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.47■□□□□ 0.87
COPS4Q9BT78 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.47■□□□□ 0.87
COPS4Q9BT78 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COPS4Q9BT78 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPS4Q9BT78 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPS4Q9BT78 DUX4L9-201ENST00000449051 1259 ntBASIC20.47■□□□□ 0.87
COPS4Q9BT78 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms