Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.68■■□□□ 1.86
NEK1Q96PY6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
NEK1Q96PY6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NEK1Q96PY6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
NEK1Q96PY6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NEK1Q96PY6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.67■■□□□ 1.86
NEK1Q96PY6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.67■■□□□ 1.86
NEK1Q96PY6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
NEK1Q96PY6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NEK1Q96PY6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.67■■□□□ 1.86
NEK1Q96PY6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NEK1Q96PY6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.67■■□□□ 1.86
NEK1Q96PY6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NEK1Q96PY6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NEK1Q96PY6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NEK1Q96PY6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NEK1Q96PY6 AC068473.5-201ENST00000616428 2072 ntBASIC26.66■■□□□ 1.86
NEK1Q96PY6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NEK1Q96PY6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NEK1Q96PY6 GUSBP5-201ENST00000418136 578 ntBASIC26.65■■□□□ 1.86
NEK1Q96PY6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NEK1Q96PY6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NEK1Q96PY6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
NEK1Q96PY6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.64■■□□□ 1.86
NEK1Q96PY6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.64■■□□□ 1.85
NEK1Q96PY6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.64■■□□□ 1.85
NEK1Q96PY6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NEK1Q96PY6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NEK1Q96PY6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.63■■□□□ 1.85
NEK1Q96PY6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.63■■□□□ 1.85
NEK1Q96PY6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NEK1Q96PY6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.63■■□□□ 1.85
NEK1Q96PY6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.63■■□□□ 1.85
NEK1Q96PY6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NEK1Q96PY6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
NEK1Q96PY6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NEK1Q96PY6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NEK1Q96PY6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.62■■□□□ 1.85
NEK1Q96PY6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.62■■□□□ 1.85
NEK1Q96PY6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
NEK1Q96PY6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
NEK1Q96PY6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NEK1Q96PY6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
NEK1Q96PY6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NEK1Q96PY6 MIR6724-1-201ENST00000616420 92 ntBASIC26.61■■□□□ 1.85
NEK1Q96PY6 MIR6724-2-201ENST00000616483 92 ntBASIC26.61■■□□□ 1.85
NEK1Q96PY6 MIR6724-4-201ENST00000617390 92 ntBASIC26.61■■□□□ 1.85
NEK1Q96PY6 MIR6724-3-201ENST00000622482 92 ntBASIC26.61■■□□□ 1.85
NEK1Q96PY6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NEK1Q96PY6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NEK1Q96PY6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.61■■□□□ 1.85
NEK1Q96PY6 AC133561.1-201ENST00000568600 2415 ntBASIC26.6■■□□□ 1.85
NEK1Q96PY6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NEK1Q96PY6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NEK1Q96PY6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.6■■□□□ 1.85
NEK1Q96PY6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NEK1Q96PY6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.6■■□□□ 1.85
NEK1Q96PY6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.6■■□□□ 1.85
NEK1Q96PY6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.6■■□□□ 1.85
NEK1Q96PY6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.6■■□□□ 1.85
NEK1Q96PY6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NEK1Q96PY6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.59■■□□□ 1.85
NEK1Q96PY6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.59■■□□□ 1.85
NEK1Q96PY6 AL353803.4-201ENST00000565882 1934 ntBASIC26.59■■□□□ 1.85
NEK1Q96PY6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NEK1Q96PY6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NEK1Q96PY6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.58■■□□□ 1.85
NEK1Q96PY6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
NEK1Q96PY6 AC144652.1-201ENST00000609974 1624 ntBASIC26.58■■□□□ 1.85
NEK1Q96PY6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NEK1Q96PY6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
NEK1Q96PY6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
NEK1Q96PY6 KRT16P3-201ENST00000439127 1283 ntBASIC26.58■■□□□ 1.85
NEK1Q96PY6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NEK1Q96PY6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.58■■□□□ 1.85
NEK1Q96PY6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NEK1Q96PY6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.58■■□□□ 1.84
NEK1Q96PY6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
NEK1Q96PY6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEK1Q96PY6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
NEK1Q96PY6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
NEK1Q96PY6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NEK1Q96PY6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.57■■□□□ 1.84
NEK1Q96PY6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.57■■□□□ 1.84
NEK1Q96PY6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEK1Q96PY6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.57■■□□□ 1.84
NEK1Q96PY6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NEK1Q96PY6 AC009102.2-201ENST00000606772 1639 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms