Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 TSPY9P-201ENST00000440215 945 ntBASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 TSPY11P-201ENST00000442607 1045 ntBASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.99■□□□□ 0.95
MS4A4EQ96PG1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A4EQ96PG1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 AC010997.5-201ENST00000609182 354 ntBASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 AL035685.1-201ENST00000636663 812 ntBASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A4EQ96PG1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 AC012676.1-201ENST00000574705 1949 ntBASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MS4A4EQ96PG1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A4EQ96PG1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A4EQ96PG1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 C9orf163-202ENST00000624034 2573 ntBASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A4EQ96PG1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 AC144652.1-201ENST00000609974 1624 ntBASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.92■□□□□ 0.94
MS4A4EQ96PG1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 UNC93B8-201ENST00000511903 705 ntBASIC20.91■□□□□ 0.94
MS4A4EQ96PG1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms