Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS33AQ96AX1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 KRT18P60-201ENST00000312876 1297 ntBASIC21.55■■□□□ 1.04
VPS33AQ96AX1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 LINC00526-201ENST00000581067 1875 ntBASIC21.55■■□□□ 1.04
VPS33AQ96AX1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS33AQ96AX1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS33AQ96AX1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 HSD17B1P1-201ENST00000590052 955 ntBASIC21.53■■□□□ 1.04
VPS33AQ96AX1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS33AQ96AX1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS33AQ96AX1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
VPS33AQ96AX1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.03
VPS33AQ96AX1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS33AQ96AX1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS33AQ96AX1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS33AQ96AX1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.49■■□□□ 1.03
VPS33AQ96AX1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 AC079630.1-202ENST00000618127 1840 ntBASIC21.48■■□□□ 1.03
VPS33AQ96AX1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS33AQ96AX1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms