Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 RP9P-202ENST00000450133 1212 ntBASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMIM4Q8WVI0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 AC090877.2-201ENST00000558441 1738 ntBASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.23■□□□□ 0.67
SMIM4Q8WVI0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM4Q8WVI0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM4Q8WVI0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 AC060814.1-201ENST00000554326 538 ntBASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 AC093536.1-201ENST00000569153 554 ntBASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM4Q8WVI0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 CR559946.2-201ENST00000623684 991 ntBASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 AC026310.3-201ENST00000625186 2373 ntBASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM4Q8WVI0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM4Q8WVI0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
SMIM4Q8WVI0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM4Q8WVI0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SMIM4Q8WVI0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms