Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHD6Q8TD26 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD6Q8TD26 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD6Q8TD26 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD6Q8TD26 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD6Q8TD26 KRT18P21-201ENST00000515767 1272 ntBASIC20.83■□□□□ 0.92
CHD6Q8TD26 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.83■□□□□ 0.92
CHD6Q8TD26 AC006058.3-201ENST00000606217 1069 ntBASIC20.83■□□□□ 0.92
CHD6Q8TD26 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHD6Q8TD26 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD6Q8TD26 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD6Q8TD26 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD6Q8TD26 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD6Q8TD26 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD6Q8TD26 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD6Q8TD26 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD6Q8TD26 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD6Q8TD26 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD6Q8TD26 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD6Q8TD26 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD6Q8TD26 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD6Q8TD26 AF201337.1-201ENST00000520239 748 ntBASIC20.79■□□□□ 0.92
CHD6Q8TD26 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD6Q8TD26 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD6Q8TD26 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD6Q8TD26 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD6Q8TD26 AC133041.1-202ENST00000642053 222 ntBASIC20.79■□□□□ 0.92
CHD6Q8TD26 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD6Q8TD26 AC007322.1-201ENST00000426983 750 ntBASIC20.78■□□□□ 0.92
CHD6Q8TD26 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD6Q8TD26 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CHD6Q8TD26 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD6Q8TD26 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD6Q8TD26 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHD6Q8TD26 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHD6Q8TD26 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD6Q8TD26 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CHD6Q8TD26 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.77■□□□□ 0.91
CHD6Q8TD26 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.77■□□□□ 0.91
CHD6Q8TD26 DUX4L16-201ENST00000555130 1264 ntBASIC20.77■□□□□ 0.91
CHD6Q8TD26 DUX4L4-201ENST00000566884 1269 ntBASIC20.77■□□□□ 0.91
CHD6Q8TD26 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD6Q8TD26 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD6Q8TD26 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD6Q8TD26 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD6Q8TD26 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.76■□□□□ 0.91
CHD6Q8TD26 AC142381.4-202ENST00000563973 229 ntBASIC20.76■□□□□ 0.91
CHD6Q8TD26 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD6Q8TD26 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD6Q8TD26 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD6Q8TD26 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHD6Q8TD26 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD6Q8TD26 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD6Q8TD26 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD6Q8TD26 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD6Q8TD26 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD6Q8TD26 AC128676.1-201ENST00000454392 318 ntBASIC20.74■□□□□ 0.91
CHD6Q8TD26 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD6Q8TD26 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD6Q8TD26 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD6Q8TD26 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD6Q8TD26 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD6Q8TD26 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD6Q8TD26 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms