Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RDH11Q8TC12 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RDH11Q8TC12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RDH11Q8TC12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RDH11Q8TC12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RDH11Q8TC12 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.14■■□□□ 1.13
RDH11Q8TC12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RDH11Q8TC12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 AC242852.2-201ENST00000615738 1807 ntBASIC22.13■■□□□ 1.13
RDH11Q8TC12 AF131216.4-201ENST00000638924 1588 ntBASIC22.13■■□□□ 1.13
RDH11Q8TC12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RDH11Q8TC12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RDH11Q8TC12 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RDH11Q8TC12 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RDH11Q8TC12 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RDH11Q8TC12 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RDH11Q8TC12 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RDH11Q8TC12 AC012354.3-201ENST00000623734 483 ntBASIC22.12■■□□□ 1.13
RDH11Q8TC12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RDH11Q8TC12 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.12■■□□□ 1.13
RDH11Q8TC12 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.12■■□□□ 1.13
RDH11Q8TC12 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RDH11Q8TC12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.11■■□□□ 1.13
RDH11Q8TC12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.11■■□□□ 1.13
RDH11Q8TC12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RDH11Q8TC12 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RDH11Q8TC12 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RDH11Q8TC12 AC004448.1-201ENST00000458332 883 ntBASIC22.11■■□□□ 1.13
RDH11Q8TC12 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.11■■□□□ 1.13
RDH11Q8TC12 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.11■■□□□ 1.13
RDH11Q8TC12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RDH11Q8TC12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RDH11Q8TC12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 KRT18P24-201ENST00000344739 1156 ntBASIC22.1■■□□□ 1.13
RDH11Q8TC12 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RDH11Q8TC12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.1■■□□□ 1.13
RDH11Q8TC12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.09■■□□□ 1.13
RDH11Q8TC12 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RDH11Q8TC12 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RDH11Q8TC12 MIR4281-201ENST00000580852 62 ntBASIC22.09■■□□□ 1.13
RDH11Q8TC12 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.09■■□□□ 1.13
RDH11Q8TC12 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RDH11Q8TC12 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.09■■□□□ 1.13
RDH11Q8TC12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RDH11Q8TC12 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RDH11Q8TC12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RDH11Q8TC12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RDH11Q8TC12 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RDH11Q8TC12 AL033527.3-201ENST00000566366 1196 ntBASIC22.08■■□□□ 1.13
RDH11Q8TC12 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.08■■□□□ 1.13
RDH11Q8TC12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RDH11Q8TC12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RDH11Q8TC12 AC137767.1-201ENST00000602918 1920 ntBASIC22.08■■□□□ 1.12
RDH11Q8TC12 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 DUX4L18-201ENST00000553347 1267 ntBASIC22.07■■□□□ 1.12
RDH11Q8TC12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.07■■□□□ 1.12
RDH11Q8TC12 THA1P-201ENST00000590384 1145 ntBASIC22.07■■□□□ 1.12
RDH11Q8TC12 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.07■■□□□ 1.12
RDH11Q8TC12 AC074183.2-201ENST00000623112 922 ntBASIC22.07■■□□□ 1.12
RDH11Q8TC12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
RDH11Q8TC12 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RDH11Q8TC12 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.07■■□□□ 1.12
RDH11Q8TC12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms