Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 ANOS2P-203ENST00000472227 1816 ntBASIC23.85■■□□□ 1.41
UBA3Q8TBC4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.85■■□□□ 1.41
UBA3Q8TBC4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBA3Q8TBC4 AL512631.2-201ENST00000604634 923 ntBASIC23.84■■□□□ 1.41
UBA3Q8TBC4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.84■■□□□ 1.41
UBA3Q8TBC4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBA3Q8TBC4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBA3Q8TBC4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 AC131281.2-201ENST00000520478 145 ntBASIC23.83■■□□□ 1.41
UBA3Q8TBC4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 MIR4466-201ENST00000606121 54 ntBASIC23.83■■□□□ 1.41
UBA3Q8TBC4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.83■■□□□ 1.41
UBA3Q8TBC4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.83■■□□□ 1.4
UBA3Q8TBC4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBA3Q8TBC4 AC079630.1-202ENST00000618127 1840 ntBASIC23.82■■□□□ 1.4
UBA3Q8TBC4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
UBA3Q8TBC4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UBA3Q8TBC4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
UBA3Q8TBC4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBA3Q8TBC4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
UBA3Q8TBC4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBA3Q8TBC4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
UBA3Q8TBC4 C17orf82-201ENST00000623772 1530 ntBASIC23.79■■□□□ 1.4
UBA3Q8TBC4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
UBA3Q8TBC4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.77■■□□□ 1.4
UBA3Q8TBC4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBA3Q8TBC4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.75■■□□□ 1.39
UBA3Q8TBC4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.75■■□□□ 1.39
UBA3Q8TBC4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms