Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 AC006015.1-201ENST00000429970 570 ntBASIC21.28■■□□□ 1
SNIP1Q8TAD8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SNIP1Q8TAD8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SNIP1Q8TAD8 RAP2CP1-201ENST00000605103 478 ntBASIC21.28■■□□□ 1
SNIP1Q8TAD8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.28■■□□□ 1
SNIP1Q8TAD8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.28■■□□□ 1
SNIP1Q8TAD8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.27■■□□□ 1
SNIP1Q8TAD8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.27■■□□□ 1
SNIP1Q8TAD8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.27■■□□□ 1
SNIP1Q8TAD8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.27■■□□□ 1
SNIP1Q8TAD8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.27■■□□□ 1
SNIP1Q8TAD8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNIP1Q8TAD8 AC141586.4-201ENST00000624558 1573 ntBASIC21.27■□□□□ 0.99
SNIP1Q8TAD8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.27■□□□□ 0.99
SNIP1Q8TAD8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 AC010501.1-201ENST00000606270 1962 ntBASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.26■□□□□ 0.99
SNIP1Q8TAD8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNIP1Q8TAD8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 ESRRAP2-201ENST00000418437 1549 ntBASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNIP1Q8TAD8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 CDCA4P2-201ENST00000441182 718 ntBASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 AC073111.5-205ENST00000641717 521 ntBASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
SNIP1Q8TAD8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNIP1Q8TAD8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 AC104771.1-201ENST00000603335 964 ntBASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms