Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK2A3Q8NEV1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSNK2A3Q8NEV1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK2A3Q8NEV1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.5■□□□□ 0.71
CSNK2A3Q8NEV1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CSNK2A3Q8NEV1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 RARRES2P1-201ENST00000474487 481 ntBASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 Z92544.1-202ENST00000571933 1220 ntBASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK2A3Q8NEV1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 KRT125P-201ENST00000546827 989 ntBASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK2A3Q8NEV1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 ANOS2P-203ENST00000472227 1816 ntBASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK2A3Q8NEV1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 AC092068.2-201ENST00000590491 1708 ntBASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 MIR6722-201ENST00000617286 78 ntBASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CSNK2A3Q8NEV1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK2A3Q8NEV1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CSNK2A3Q8NEV1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms