Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 SUDS3P1-201ENST00000505831 966 ntBASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 AF213884.3-201ENST00000563833 479 ntBASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 AC011298.3-201ENST00000615796 283 ntBASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CNEP1R1Q8N9A8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.95■□□□□ 0.79
CNEP1R1Q8N9A8 AC141586.4-201ENST00000624558 1573 ntBASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNEP1R1Q8N9A8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 LINC00543-201ENST00000567234 1845 ntBASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 AL139125.2-201ENST00000623134 1869 ntBASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNEP1R1Q8N9A8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 MIR3181-201ENST00000578512 73 ntBASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 pRNA.6-201ENST00000610482 90 ntBASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 pRNA.5-201ENST00000612139 90 ntBASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 pRNA.11-201ENST00000618423 90 ntBASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 pRNA.13-201ENST00000619112 90 ntBASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNEP1R1Q8N9A8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 AP001330.3-201ENST00000520123 633 ntBASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNEP1R1Q8N9A8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 AC008764.7-201ENST00000593779 1081 ntBASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 AC136469.2-201ENST00000623944 1028 ntBASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 AL136967.2-201ENST00000623968 743 ntBASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNEP1R1Q8N9A8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 MIR939-201ENST00000401314 82 ntBASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 ZNRF2P3-201ENST00000424200 374 ntBASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNEP1R1Q8N9A8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms