Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.77■■□□□ 1.4
TTC9BQ8N6N2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC9BQ8N6N2 AC004812.2-201ENST00000611079 2094 ntBASIC23.77■■□□□ 1.4
TTC9BQ8N6N2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 AC027682.1-201ENST00000562846 899 ntBASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC9BQ8N6N2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 AC099791.1-201ENST00000416440 715 ntBASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 LINC00543-201ENST00000567234 1845 ntBASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC9BQ8N6N2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 AC141586.4-201ENST00000624558 1573 ntBASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 RARRES2P6-201ENST00000567333 442 ntBASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
TTC9BQ8N6N2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 RASA4CP-201ENST00000424092 1398 ntBASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC9BQ8N6N2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC9BQ8N6N2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC9BQ8N6N2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC9BQ8N6N2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC9BQ8N6N2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 AC026271.2-201ENST00000428091 497 ntBASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC9BQ8N6N2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.7■■□□□ 1.39
TTC9BQ8N6N2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TTC9BQ8N6N2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.7■■□□□ 1.39
TTC9BQ8N6N2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TTC9BQ8N6N2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TTC9BQ8N6N2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.7■■□□□ 1.38
TTC9BQ8N6N2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TTC9BQ8N6N2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TTC9BQ8N6N2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.69■■□□□ 1.38
TTC9BQ8N6N2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC9BQ8N6N2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC9BQ8N6N2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 ABCB10P4-201ENST00000566803 2184 ntBASIC23.68■■□□□ 1.38
TTC9BQ8N6N2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 BX842568.3-201ENST00000418104 571 ntBASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 AC233992.3-201ENST00000607491 485 ntBASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC9BQ8N6N2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms