Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
RAB43Q86YS6 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.33■■□□□ 1.01
RAB43Q86YS6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB43Q86YS6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAB43Q86YS6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.33■■□□□ 1
RAB43Q86YS6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAB43Q86YS6 AL139125.2-201ENST00000623134 1869 ntBASIC21.32■■□□□ 1
RAB43Q86YS6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.31■■□□□ 1
RAB43Q86YS6 ZNRF2P3-201ENST00000424200 374 ntBASIC21.31■■□□□ 1
RAB43Q86YS6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAB43Q86YS6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.31■■□□□ 1
RAB43Q86YS6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAB43Q86YS6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB43Q86YS6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAB43Q86YS6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.31■■□□□ 1
RAB43Q86YS6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.31■■□□□ 1
RAB43Q86YS6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 AC009102.2-201ENST00000606772 1639 ntBASIC21.3■■□□□ 1
RAB43Q86YS6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.3■■□□□ 1
RAB43Q86YS6 AC099791.2-201ENST00000605725 427 ntBASIC21.3■■□□□ 1
RAB43Q86YS6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.3■■□□□ 1
RAB43Q86YS6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB43Q86YS6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RAB43Q86YS6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB43Q86YS6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.29■■□□□ 1
RAB43Q86YS6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.29■■□□□ 1
RAB43Q86YS6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB43Q86YS6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.29■■□□□ 1
RAB43Q86YS6 AF213884.3-201ENST00000563833 479 ntBASIC21.29■■□□□ 1
RAB43Q86YS6 AL138724.1-201ENST00000606771 1088 ntBASIC21.29■■□□□ 1
RAB43Q86YS6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.29■■□□□ 1
RAB43Q86YS6 AC241377.3-202ENST00000626088 1088 ntBASIC21.29■■□□□ 1
RAB43Q86YS6 AC241585.3-202ENST00000628937 1088 ntBASIC21.29■■□□□ 1
RAB43Q86YS6 AC245100.8-202ENST00000629247 1058 ntBASIC21.29■■□□□ 1
RAB43Q86YS6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.29■■□□□ 1
RAB43Q86YS6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB43Q86YS6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB43Q86YS6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAB43Q86YS6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.28■■□□□ 1
RAB43Q86YS6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.28■■□□□ 1
RAB43Q86YS6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.28■■□□□ 1
RAB43Q86YS6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB43Q86YS6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAB43Q86YS6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.28■■□□□ 1
RAB43Q86YS6 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.28■■□□□ 1
RAB43Q86YS6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.28■■□□□ 1
RAB43Q86YS6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB43Q86YS6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB43Q86YS6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB43Q86YS6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RAB43Q86YS6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RAB43Q86YS6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.27■■□□□ 1
RAB43Q86YS6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
RAB43Q86YS6 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
RAB43Q86YS6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 MIR4767-201ENST00000582827 78 ntBASIC21.27■■□□□ 1
RAB43Q86YS6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB43Q86YS6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB43Q86YS6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RAB43Q86YS6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB43Q86YS6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RAB43Q86YS6 MIR939-201ENST00000401314 82 ntBASIC21.26■□□□□ 0.99
RAB43Q86YS6 AP001330.3-201ENST00000520123 633 ntBASIC21.26■□□□□ 0.99
RAB43Q86YS6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB43Q86YS6 AC011298.3-201ENST00000615796 283 ntBASIC21.26■□□□□ 0.99
RAB43Q86YS6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 C17orf82-201ENST00000623772 1530 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms