Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.53■■■□□ 2
USP48Q86UV5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
USP48Q86UV5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.53■■■□□ 2
USP48Q86UV5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.53■■■□□ 2
USP48Q86UV5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.53■■■□□ 2
USP48Q86UV5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.53■■■□□ 2
USP48Q86UV5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.53■■■□□ 2
USP48Q86UV5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 SLC6A10P-202ENST00000431994 2058 ntBASIC27.52■■■□□ 2
USP48Q86UV5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.52■■■□□ 2
USP48Q86UV5 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.52■■■□□ 2
USP48Q86UV5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.52■■■□□ 2
USP48Q86UV5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.52■■■□□ 2
USP48Q86UV5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USP48Q86UV5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.51■■□□□ 1.99
USP48Q86UV5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
USP48Q86UV5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.51■■□□□ 1.99
USP48Q86UV5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.51■■□□□ 1.99
USP48Q86UV5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USP48Q86UV5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
USP48Q86UV5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
USP48Q86UV5 AP003733.4-201ENST00000623785 1697 ntBASIC27.5■■□□□ 1.99
USP48Q86UV5 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.5■■□□□ 1.99
USP48Q86UV5 KRT18P5-201ENST00000436075 1291 ntBASIC27.5■■□□□ 1.99
USP48Q86UV5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.5■■□□□ 1.99
USP48Q86UV5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.5■■□□□ 1.99
USP48Q86UV5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
USP48Q86UV5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
USP48Q86UV5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
USP48Q86UV5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.49■■□□□ 1.99
USP48Q86UV5 AC233992.3-201ENST00000607491 485 ntBASIC27.49■■□□□ 1.99
USP48Q86UV5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.49■■□□□ 1.99
USP48Q86UV5 AC092437.1-201ENST00000624794 1048 ntBASIC27.49■■□□□ 1.99
USP48Q86UV5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
USP48Q86UV5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.49■■□□□ 1.99
USP48Q86UV5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
USP48Q86UV5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USP48Q86UV5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.48■■□□□ 1.99
USP48Q86UV5 AC136469.2-201ENST00000623944 1028 ntBASIC27.48■■□□□ 1.99
USP48Q86UV5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
USP48Q86UV5 AC009102.2-201ENST00000606772 1639 ntBASIC27.48■■□□□ 1.99
USP48Q86UV5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
USP48Q86UV5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
USP48Q86UV5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
USP48Q86UV5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.48■■□□□ 1.99
USP48Q86UV5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
USP48Q86UV5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
USP48Q86UV5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
USP48Q86UV5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.47■■□□□ 1.99
USP48Q86UV5 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.47■■□□□ 1.99
USP48Q86UV5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.47■■□□□ 1.99
USP48Q86UV5 AL031602.1-201ENST00000633169 911 ntBASIC27.47■■□□□ 1.99
USP48Q86UV5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
USP48Q86UV5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
USP48Q86UV5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
USP48Q86UV5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
USP48Q86UV5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.46■■□□□ 1.99
USP48Q86UV5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
USP48Q86UV5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.46■■□□□ 1.99
USP48Q86UV5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.46■■□□□ 1.99
USP48Q86UV5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
USP48Q86UV5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.46■■□□□ 1.99
USP48Q86UV5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.46■■□□□ 1.99
USP48Q86UV5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
USP48Q86UV5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
USP48Q86UV5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.46■■□□□ 1.99
USP48Q86UV5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
USP48Q86UV5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
USP48Q86UV5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.99
USP48Q86UV5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.98
USP48Q86UV5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
USP48Q86UV5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.45■■□□□ 1.98
USP48Q86UV5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
USP48Q86UV5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
USP48Q86UV5 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.45■■□□□ 1.98
USP48Q86UV5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.45■■□□□ 1.98
USP48Q86UV5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
USP48Q86UV5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
USP48Q86UV5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.44■■□□□ 1.98
USP48Q86UV5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
USP48Q86UV5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
USP48Q86UV5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms