Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4RL2Q86UN3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 LINC00526-201ENST00000581067 1875 ntBASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4RL2Q86UN3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 MIR4508-201ENST00000584178 70 ntBASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4RL2Q86UN3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4RL2Q86UN3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 AC011551.1-201ENST00000614101 683 ntBASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN4RL2Q86UN3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RTN4RL2Q86UN3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4RL2Q86UN3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN4RL2Q86UN3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 YBX1P4-201ENST00000392794 808 ntBASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN4RL2Q86UN3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTN4RL2Q86UN3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 AC079630.1-202ENST00000618127 1840 ntBASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTN4RL2Q86UN3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms