Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRPL55Q7Z7F7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 PVT1_1.1-201ENST00000615125 194 ntBASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MRPL55Q7Z7F7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL55Q7Z7F7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 AF131216.4-201ENST00000638924 1588 ntBASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 YBX1P4-201ENST00000392794 808 ntBASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
MRPL55Q7Z7F7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 C9orf163-202ENST00000624034 2573 ntBASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 MIR4508-201ENST00000584178 70 ntBASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms