Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.554e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.34e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.73■□□□□ 0.274e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.96■□□□□ 0.144e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.91■□□□□ 0.144e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-220ENST00000542922 2174 ntTSL 213.64□□□□□ -0.234e-8■■■■□ 24.6
LARP4Q71RC2 SLC3A2-214ENST00000539507 534 ntTSL 36.01□□□□□ -1.454e-8■■■■□ 24.6
LARP4Q71RC2 NME1-201ENST00000013034 796 ntTSL 3 BASIC10.31□□□□□ -0.761e-7■■■■□ 24.6
LARP4Q71RC2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.37■■□□□ 1.013e-6■■■■□ 24.5
LARP4Q71RC2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.93e-6■■■■□ 24.5
LARP4Q71RC2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.08■□□□□ 0.813e-6■■■■□ 24.5
LARP4Q71RC2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.9■□□□□ 0.783e-6■■■■□ 24.5
LARP4Q71RC2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.633e-6■■■■□ 24.5
LARP4Q71RC2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.39■□□□□ 0.533e-6■■■■□ 24.5
LARP4Q71RC2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.95■□□□□ 0.143e-6■■■■□ 24.5
LARP4Q71RC2 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.69■□□□□ 0.13e-6■■■■□ 24.5
LARP4Q71RC2 BID-207ENST00000494097 2429 ntTSL 1 (best)15.44■□□□□ 0.063e-6■■■■□ 24.5
LARP4Q71RC2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.023e-9■■■■□ 24.5
LARP4Q71RC2 TMED1-202ENST00000586835 713 ntTSL 213.47□□□□□ -0.253e-9■■■■□ 24.5
LARP4Q71RC2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.065e-9■■■■□ 24.4
LARP4Q71RC2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.195e-9■■■■□ 24.4
LARP4Q71RC2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.225e-9■■■■□ 24.4
LARP4Q71RC2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.285e-9■■■■□ 24.4
LARP4Q71RC2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.585e-9■■■■□ 24.4
LARP4Q71RC2 XXYLT1-210ENST00000491138 738 ntTSL 320.74■□□□□ 0.916e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-208ENST00000473200 698 ntTSL 218.68■□□□□ 0.586e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.68■□□□□ 0.586e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.466e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-203ENST00000418940 582 ntTSL 417.37■□□□□ 0.376e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.39■□□□□ 0.216e-7■■■■□ 24.4
LARP4Q71RC2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.66□□□□□ -0.066e-7■■■■□ 24.4
LARP4Q71RC2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.65□□□□□ -0.063e-11■■■■□ 24.4
LARP4Q71RC2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.31e-6■■■■□ 24.4
LARP4Q71RC2 NEK7-205ENST00000442588 519 ntTSL 515.45■□□□□ 0.061e-6■■■■□ 24.4
LARP4Q71RC2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.34■□□□□ 0.051e-6■■■■□ 24.4
LARP4Q71RC2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.011e-6■■■■□ 24.4
LARP4Q71RC2 MMS22L-209ENST00000509383 3083 ntTSL 1 (best)9.62□□□□□ -0.875e-6■■■■□ 24.4
LARP4Q71RC2 NEK7-208ENST00000544035 565 ntTSL 58.28□□□□□ -1.081e-6■■■■□ 24.4
LARP4Q71RC2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.225e-6■■■■□ 24.4
LARP4Q71RC2 MMS22L-210ENST00000510018 966 ntTSL 57.15□□□□□ -1.265e-6■■■■□ 24.4
LARP4Q71RC2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.375e-6■■■■□ 24.4
LARP4Q71RC2 NEK7-204ENST00000417895 409 ntTSL 34.8□□□□□ -1.641e-6■■■■□ 24.4
LARP4Q71RC2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.815e-6■■■■□ 24.4
LARP4Q71RC2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.83■■□□□ 1.576e-8■■■■□ 24.4
LARP4Q71RC2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.576e-8■■■■□ 24.4
LARP4Q71RC2 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC11.95□□□□□ -0.59e-8■■■■□ 24.3
LARP4Q71RC2 MCM5-209ENST00000493076 4599 ntTSL 211.24□□□□□ -0.619e-8■■■■□ 24.3
LARP4Q71RC2 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.749e-8■■■■□ 24.3
LARP4Q71RC2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.821e-24■■■■□ 24.3
LARP4Q71RC2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.441e-24■■■■□ 24.3
LARP4Q71RC2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.281e-24■■■■□ 24.3
LARP4Q71RC2 DHRS2-208ENST00000556729 5318 ntTSL 215.63■□□□□ 0.091e-24■■■■□ 24.3
LARP4Q71RC2 DHRS2-209ENST00000557535 927 ntTSL 515.41■□□□□ 0.061e-24■■■■□ 24.3
LARP4Q71RC2 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)14.9□□□□□ -0.021e-24■■■■□ 24.3
LARP4Q71RC2 RPS29-208ENST00000557519 333 ntTSL 38.94□□□□□ -0.983e-31■■■■□ 24.3
LARP4Q71RC2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.42■□□□□ 0.228e-7■■■■□ 24.3
LARP4Q71RC2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.13■□□□□ 0.018e-7■■■■□ 24.3
LARP4Q71RC2 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC9.73□□□□□ -0.858e-7■■■■□ 24.3
LARP4Q71RC2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.68e-7■■■■□ 24.3
LARP4Q71RC2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.461e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-NBL1-202ENST00000602384 999 ntTSL 516.32■□□□□ 0.21e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-NBL1-203ENST00000602450 590 ntTSL 216.07■□□□□ 0.161e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-NBL1-201ENST00000602293 820 ntTSL 314.4□□□□□ -0.11e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-209ENST00000498642 669 ntTSL 214.05□□□□□ -0.161e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-205ENST00000481464 657 ntTSL 313□□□□□ -0.331e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-203ENST00000467029 583 ntTSL 212.75□□□□□ -0.371e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.651e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC10.94□□□□□ -0.661e-6■■■■□ 24.3
LARP4Q71RC2 MINOS1-206ENST00000485362 438 ntTSL 24.74□□□□□ -1.651e-6■■■■□ 24.3
LARP4Q71RC2 MDK-209ENST00000489525 1339 ntTSL 523.05■■□□□ 1.289e-12■■■■□ 24.3
LARP4Q71RC2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.089e-12■■■■□ 24.3
LARP4Q71RC2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 19e-12■■■■□ 24.3
LARP4Q71RC2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.979e-12■■■■□ 24.3
LARP4Q71RC2 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.08■□□□□ 0.649e-12■■■■□ 24.3
LARP4Q71RC2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.52■□□□□ 0.569e-12■■■■□ 24.3
LARP4Q71RC2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.459e-12■■■■□ 24.3
LARP4Q71RC2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.399e-12■■■■□ 24.3
LARP4Q71RC2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.051e-8■■■■□ 24.3
LARP4Q71RC2 AZGP1-205ENST00000483612 679 ntTSL 314.62□□□□□ -0.071e-8■■■■□ 24.3
LARP4Q71RC2 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.511e-8■■■■□ 24.3
LARP4Q71RC2 AZGP1-203ENST00000419575 719 ntTSL 311.33□□□□□ -0.61e-8■■■■□ 24.3
LARP4Q71RC2 MRPL4-211ENST00000592514 1118 ntAPPRIS ALT2 TSL 520.83■□□□□ 0.934e-6■■■■□ 24.2
LARP4Q71RC2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.013e-11■■■■□ 24.2
LARP4Q71RC2 PCNX3-202ENST00000439247 3104 ntTSL 1 (best)13.57□□□□□ -0.243e-11■■■■□ 24.2
LARP4Q71RC2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.131e-10■■■■□ 24.2
LARP4Q71RC2 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.924e-6■■■■□ 24.2
LARP4Q71RC2 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.114e-6■■■■□ 24.2
LARP4Q71RC2 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.24e-6■■■■□ 24.2
LARP4Q71RC2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.34e-6■■■■□ 24.2
LARP4Q71RC2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.11■□□□□ 0.494e-7■■■■□ 24.2
LARP4Q71RC2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.354e-7■■■■□ 24.2
LARP4Q71RC2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.294e-7■■■■□ 24.2
LARP4Q71RC2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.054e-7■■■■□ 24.2
LARP4Q71RC2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.45□□□□□ -0.14e-7■■■■□ 24.2
LARP4Q71RC2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.81■■□□□ 1.241e-10■■■■□ 24.2
LARP4Q71RC2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.121e-10■■■■□ 24.2
LARP4Q71RC2 DGAT1-203ENST00000524965 1336 ntTSL 512.11□□□□□ -0.471e-10■■■■□ 24.2
LARP4Q71RC2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.122e-6■■■■□ 24.2
LARP4Q71RC2 SMC4-221ENST00000489573 1553 ntTSL 1 (best)20.95■□□□□ 0.944e-12■■■■□ 24.2
LARP4Q71RC2 SMC4-209ENST00000468653 1756 ntTSL 218.49■□□□□ 0.554e-12■■■■□ 24.2
Retrieved 100 of 15,922 protein–RNA pairs in 145.1 ms