RNA–Protein interactions for RNA: ENST00000417895.1

NEK7-204, Transcript of NIMA related kinase 7, human

TSL 3

Gene NEK7, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK7-204	ENST00000417895	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.98	■■□□□ 1.11
NEK7-204	ENST00000417895	CHIC1	Q5VXU3	224 aa		21.05	■□□□□ 0.96
NEK7-204	ENST00000417895	SENP3	Q9H4L4	574 aa	Predicted RBP	18.77	■□□□□ 0.6
NEK7-204	ENST00000417895	PHF23	Q9BUL5	403 aa	Predicted RBP	18.53	■□□□□ 0.56
NEK7-204	ENST00000417895	POTED	Q86YR6	584 aa		17.55	■□□□□ 0.4
NEK7-204	ENST00000417895	FOXD1	Q16676	465 aa		17.45	■□□□□ 0.38
NEK7-204	ENST00000417895	PLPPR3	Q6T4P5	718 aa		16.91	■□□□□ 0.3
NEK7-204	ENST00000417895	MSH5	O43196	834 aa		16.58	■□□□□ 0.24
NEK7-204	ENST00000417895	PPP6R1	Q9UPN7	881 aa		16.42	■□□□□ 0.22
NEK7-204	ENST00000417895	ADRA2B	P18089	450 aa		16.38	■□□□□ 0.21
NEK7-204	ENST00000417895	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.34	■□□□□ 0.21
NEK7-204	ENST00000417895	SCAF1	Q9H7N4	1312 aa	Known RBP	15.05	■□□□□ -0
NEK7-204	ENST00000417895	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.99	□□□□□ -0.01
NEK7-204	ENST00000417895	DMRT2	Q9Y5R5	561 aa		14.91	□□□□□ -0.02
NEK7-204	ENST00000417895	PPP4R3CP	Q6ZMV5	832 aa		14.82	□□□□□ -0.04
NEK7-204	ENST00000417895	CACNB1	Q02641	598 aa	Predicted RBP	14.78	□□□□□ -0.04
NEK7-204	ENST00000417895	CNKSR2	Q8WXI2	1034 aa		14.52	□□□□□ -0.09
NEK7-204	ENST00000417895	HOXD11	P31277	338 aa	Predicted RBP	14.42	□□□□□ -0.1
NEK7-204	ENST00000417895	RNF216	Q9NWF9	866 aa	Predicted RBP	14.36	□□□□□ -0.11
NEK7-204	ENST00000417895	NCBP3	Q53F19	620 aa	Known RBP	14.33	□□□□□ -0.12
NEK7-204	ENST00000417895	DCAF8L1	A6NGE4	600 aa		14.25	□□□□□ -0.13
NEK7-204	ENST00000417895	NPM3	O75607	178 aa	Known RBP	14.08	□□□□□ -0.16
NEK7-204	ENST00000417895	RNF39	Q9H2S5	420 aa		14.05	□□□□□ -0.16
NEK7-204	ENST00000417895	DNAJC5B	Q9UF47	199 aa		13.95	□□□□□ -0.18
NEK7-204	ENST00000417895	KCNA4	P22459	653 aa		13.94	□□□□□ -0.18
NEK7-204	ENST00000417895	C1QBP	Q07021	282 aa	Known RBP	13.82	□□□□□ -0.2
NEK7-204	ENST00000417895	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
NEK7-204	ENST00000417895	POTEH	Q6S545	545 aa		13.6	□□□□□ -0.23
NEK7-204	ENST00000417895		U3KPZ7	1027 aa	Predicted RBP	13.44	□□□□□ -0.26
NEK7-204	ENST00000417895	SLC4A2	P04920	1241 aa		13.41	□□□□□ -0.26
NEK7-204	ENST00000417895	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.21	□□□□□ -0.29
NEK7-204	ENST00000417895	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.19	□□□□□ -0.3
NEK7-204	ENST00000417895	CAPN15	O75808	1086 aa		13.18	□□□□□ -0.3
NEK7-204	ENST00000417895	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.17	□□□□□ -0.3
NEK7-204	ENST00000417895	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.17	□□□□□ -0.3
NEK7-204	ENST00000417895	APLP2	Q06481	763 aa		13.14	□□□□□ -0.31
NEK7-204	ENST00000417895	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.09	□□□□□ -0.31
NEK7-204	ENST00000417895	DSG3	P32926	999 aa		13.07	□□□□□ -0.32
NEK7-204	ENST00000417895	MYCN	P04198	464 aa	Predicted RBP	13.04	□□□□□ -0.32
NEK7-204	ENST00000417895	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.01	□□□□□ -0.33
NEK7-204	ENST00000417895	TRH	P20396	242 aa	Predicted RBP	12.99	□□□□□ -0.33
NEK7-204	ENST00000417895	FOXD4L1	Q9NU39	408 aa		12.98	□□□□□ -0.33
NEK7-204	ENST00000417895	ABCB7	O75027	752 aa		12.86	□□□□□ -0.35
NEK7-204	ENST00000417895	ZBTB22	O15209	634 aa		12.8	□□□□□ -0.36
NEK7-204	ENST00000417895	POLA2	Q14181	598 aa		12.7	□□□□□ -0.38
NEK7-204	ENST00000417895	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.68	□□□□□ -0.38
NEK7-204	ENST00000417895	ATXN8OS	P0DMR3	200 aa		12.61	□□□□□ -0.39
NEK7-204	ENST00000417895	RBM42	Q9BTD8	480 aa	Known RBP	12.5	□□□□□ -0.41
NEK7-204	ENST00000417895	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.49	□□□□□ -0.41
NEK7-204	ENST00000417895	CHRDL2	Q6WN34	429 aa		12.4	□□□□□ -0.42
NEK7-204	ENST00000417895	SP7	Q8TDD2	431 aa	Predicted RBP	12.37	□□□□□ -0.43
NEK7-204	ENST00000417895	CSRNP3	Q8WYN3	585 aa		12.37	□□□□□ -0.43
NEK7-204	ENST00000417895	EHMT2	Q96KQ7	1210 aa		12.27	□□□□□ -0.45
NEK7-204	ENST00000417895	OSCAR	Q8IYS5	282 aa		12.26	□□□□□ -0.45
NEK7-204	ENST00000417895	AKT1S1	Q96B36	256 aa		12.24	□□□□□ -0.45
NEK7-204	ENST00000417895	FBLN2	P98095	1184 aa		12.23	□□□□□ -0.45
NEK7-204	ENST00000417895	MKRN4P	Q13434	485 aa	Predicted RBP	12.13	□□□□□ -0.47
NEK7-204	ENST00000417895	REM2	Q8IYK8	340 aa	Predicted RBP	12.11	□□□□□ -0.47
NEK7-204	ENST00000417895	SPDYE2B	A6NHP3	402 aa		12.1	□□□□□ -0.47
NEK7-204	ENST00000417895	SPDYE6	P0CI01	402 aa		12.1	□□□□□ -0.47
NEK7-204	ENST00000417895	SPDYE2	Q495Y8	402 aa		12.1	□□□□□ -0.47
NEK7-204	ENST00000417895	HAX1	O00165	279 aa		12	□□□□□ -0.49
NEK7-204	ENST00000417895	ZNF692	Q9BU19	519 aa	Predicted RBP	11.97	□□□□□ -0.49
NEK7-204	ENST00000417895	PITPNM1	O00562	1244 aa		11.96	□□□□□ -0.49
NEK7-204	ENST00000417895	SSUH2	Q9Y2M2	353 aa		11.95	□□□□□ -0.5
NEK7-204	ENST00000417895	PIP4P2	Q8N4L2	257 aa		11.93	□□□□□ -0.5
NEK7-204	ENST00000417895	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.86	□□□□□ -0.51
NEK7-204	ENST00000417895	FXR2	P51116	673 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
NEK7-204	ENST00000417895	CLEC11A	Q9Y240	323 aa		11.79	□□□□□ -0.52
NEK7-204	ENST00000417895	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
NEK7-204	ENST00000417895	EVX2	Q03828	476 aa		11.73	□□□□□ -0.53
NEK7-204	ENST00000417895	PRKAR2A	P13861	404 aa	Known RBP	11.66	□□□□□ -0.54
NEK7-204	ENST00000417895	SPDYE4	A6NLX3	237 aa		11.65	□□□□□ -0.54
NEK7-204	ENST00000417895	PRR29	P0C7W0	189 aa		11.64	□□□□□ -0.55
NEK7-204	ENST00000417895	LHX8	Q68G74	356 aa		11.62	□□□□□ -0.55
NEK7-204	ENST00000417895	PLSCR2	Q9NRY7	297 aa		11.62	□□□□□ -0.55
NEK7-204	ENST00000417895	STAG3	Q9UJ98	1225 aa		11.54	□□□□□ -0.56
NEK7-204	ENST00000417895	CHADL	Q6NUI6	762 aa		11.53	□□□□□ -0.56
NEK7-204	ENST00000417895	C19orf67	A6NJJ6	358 aa		11.46	□□□□□ -0.57
NEK7-204	ENST00000417895	GABBR2	O75899	941 aa		11.43	□□□□□ -0.58
NEK7-204	ENST00000417895	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.42	□□□□□ -0.58
NEK7-204	ENST00000417895	PROM2	Q8N271	834 aa		11.41	□□□□□ -0.58
NEK7-204	ENST00000417895	CREBZF	Q9NS37	354 aa		11.38	□□□□□ -0.59
NEK7-204	ENST00000417895	CD44	P16070	742 aa	Known RBP	11.3	□□□□□ -0.6
NEK7-204	ENST00000417895	NPM1	P06748	294 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
NEK7-204	ENST00000417895	MNX1	P50219	401 aa	Predicted RBP	11.21	□□□□□ -0.61
NEK7-204	ENST00000417895	FKBP8	Q14318	412 aa		11.2	□□□□□ -0.62
NEK7-204	ENST00000417895	CLCN6	P51797	869 aa		11.19	□□□□□ -0.62
NEK7-204	ENST00000417895	ZRANB1	Q9UGI0	708 aa		11.16	□□□□□ -0.62
NEK7-204	ENST00000417895	POTEI	P0CG38	1075 aa		11.15	□□□□□ -0.62
NEK7-204	ENST00000417895	ZNF579	Q8NAF0	562 aa	Known RBP	11.15	□□□□□ -0.62
NEK7-204	ENST00000417895	PAK3	O75914	559 aa	Predicted RBP	11.13	□□□□□ -0.63
NEK7-204	ENST00000417895	MIER1	Q8N108	512 aa		11.11	□□□□□ -0.63
NEK7-204	ENST00000417895	PLEKHG5	O94827	1062 aa		11.1	□□□□□ -0.63
NEK7-204	ENST00000417895	PLCD3	Q8N3E9	789 aa		11.03	□□□□□ -0.64
NEK7-204	ENST00000417895	DCBLD2	Q96PD2	775 aa		11	□□□□□ -0.65
NEK7-204	ENST00000417895	POTEM	A6NI47	508 aa		10.99	□□□□□ -0.65
NEK7-204	ENST00000417895	PHF12	Q96QT6	1004 aa		10.99	□□□□□ -0.65
NEK7-204	ENST00000417895	FBXO3	Q9UK99	471 aa		10.99	□□□□□ -0.65
NEK7-204	ENST00000417895	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms