Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF213Q63HN8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RNF213Q63HN8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF213Q63HN8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF213Q63HN8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 pRNA.6-201ENST00000610482 90 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 pRNA.5-201ENST00000612139 90 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 pRNA.11-201ENST00000618423 90 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 pRNA.13-201ENST00000619112 90 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF213Q63HN8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 AC090877.2-201ENST00000558441 1738 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF213Q63HN8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF213Q63HN8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF213Q63HN8 UNC93B5-201ENST00000530315 699 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC12.29□□□□□ -0.44
RNF213Q63HN8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF213Q63HN8 RCN1P1-201ENST00000400413 996 ntBASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC128676.1-201ENST00000454392 318 ntBASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC008550.1-201ENST00000511500 884 ntBASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 AL121832.2-201ENST00000610979 668 ntBASIC12.28□□□□□ -0.44
RNF213Q63HN8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF213Q63HN8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC006058.3-201ENST00000606217 1069 ntBASIC12.28□□□□□ -0.44
RNF213Q63HN8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF213Q63HN8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF213Q63HN8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF213Q63HN8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RNF213Q63HN8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RNF213Q63HN8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RNF213Q63HN8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
RNF213Q63HN8 AC005181.1-201ENST00000604782 1256 ntBASIC12.27□□□□□ -0.44
RNF213Q63HN8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
RNF213Q63HN8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RNF213Q63HN8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC12.27□□□□□ -0.44
RNF213Q63HN8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RNF213Q63HN8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF213Q63HN8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF213Q63HN8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RNF213Q63HN8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF213Q63HN8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF213Q63HN8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF213Q63HN8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF213Q63HN8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF213Q63HN8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF213Q63HN8 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF213Q63HN8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF213Q63HN8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF213Q63HN8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF213Q63HN8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RNF213Q63HN8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 LBH-205ENST00000407930 756 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF213Q63HN8 AC091060.1-201ENST00000623524 1766 ntBASIC12.25□□□□□ -0.45
RNF213Q63HN8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF213Q63HN8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC12.24□□□□□ -0.45
RNF213Q63HN8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.24□□□□□ -0.45
RNF213Q63HN8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms