Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RUNDC3AQ59EK9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RUNDC3AQ59EK9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RUNDC3AQ59EK9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RUNDC3AQ59EK9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RUNDC3AQ59EK9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RUNDC3AQ59EK9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 AC120024.1-201ENST00000562672 995 ntBASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RUNDC3AQ59EK9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 AC139795.1-202ENST00000500444 432 ntBASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 AF131216.4-201ENST00000638924 1588 ntBASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RUNDC3AQ59EK9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
RUNDC3AQ59EK9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.19■□□□□ 0.98
RUNDC3AQ59EK9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.19■□□□□ 0.98
RUNDC3AQ59EK9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUNDC3AQ59EK9 DUX4L18-201ENST00000553347 1267 ntBASIC21.19■□□□□ 0.98
RUNDC3AQ59EK9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUNDC3AQ59EK9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 AC004448.1-201ENST00000458332 883 ntBASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUNDC3AQ59EK9 AC137767.1-201ENST00000602918 1920 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms