Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN20Q4JDL3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN20Q4JDL3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN20Q4JDL3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 AL356441.2-201ENST00000443009 864 ntBASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN20Q4JDL3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 AC009102.2-201ENST00000606772 1639 ntBASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
PTPN20Q4JDL3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN20Q4JDL3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 AL117332.1-201ENST00000622628 974 ntBASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 C9orf163-202ENST00000624034 2573 ntBASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.71■■□□□ 1.39
PTPN20Q4JDL3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
PTPN20Q4JDL3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PTPN20Q4JDL3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN20Q4JDL3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN20Q4JDL3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN20Q4JDL3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.7■■□□□ 1.38
PTPN20Q4JDL3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN20Q4JDL3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTPN20Q4JDL3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 AC144652.1-201ENST00000609974 1624 ntBASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.68■■□□□ 1.38
PTPN20Q4JDL3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 MIR3621-201ENST00000580529 85 ntBASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.67■■□□□ 1.38
PTPN20Q4JDL3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.66■■□□□ 1.38
PTPN20Q4JDL3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTPN20Q4JDL3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
PTPN20Q4JDL3 AL353803.4-201ENST00000565882 1934 ntBASIC23.66■■□□□ 1.38
PTPN20Q4JDL3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTPN20Q4JDL3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTPN20Q4JDL3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms