Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 AC012676.1-201ENST00000574705 1949 ntBASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 AC005703.6-201ENST00000623265 1329 ntBASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 TSPY9P-201ENST00000440215 945 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 TSPY11P-201ENST00000442607 1045 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 MTDHP2-201ENST00000601468 714 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms