Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.22■□□□□ 0.67
EFNB3Q15768 AC006455.2-201ENST00000429931 906 ntBASIC19.22■□□□□ 0.67
EFNB3Q15768 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
EFNB3Q15768 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
EFNB3Q15768 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
EFNB3Q15768 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.21■□□□□ 0.67
EFNB3Q15768 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EFNB3Q15768 MIR939-201ENST00000401314 82 ntBASIC19.21■□□□□ 0.67
EFNB3Q15768 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNB3Q15768 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 MIR3181-201ENST00000578512 73 ntBASIC19.21■□□□□ 0.67
EFNB3Q15768 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNB3Q15768 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
EFNB3Q15768 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
EFNB3Q15768 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EFNB3Q15768 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB3Q15768 AP001330.3-201ENST00000520123 633 ntBASIC19.2■□□□□ 0.66
EFNB3Q15768 AF213884.3-201ENST00000563833 479 ntBASIC19.2■□□□□ 0.66
EFNB3Q15768 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.2■□□□□ 0.66
EFNB3Q15768 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.2■□□□□ 0.66
EFNB3Q15768 AL136967.2-201ENST00000623968 743 ntBASIC19.2■□□□□ 0.66
EFNB3Q15768 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB3Q15768 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB3Q15768 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB3Q15768 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFNB3Q15768 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EFNB3Q15768 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB3Q15768 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB3Q15768 AC091305.1-201ENST00000479476 895 ntBASIC19.19■□□□□ 0.66
EFNB3Q15768 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB3Q15768 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFNB3Q15768 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.19■□□□□ 0.66
EFNB3Q15768 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.18■□□□□ 0.66
EFNB3Q15768 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EFNB3Q15768 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.18■□□□□ 0.66
EFNB3Q15768 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.18■□□□□ 0.66
EFNB3Q15768 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EFNB3Q15768 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFNB3Q15768 FP325331.1-202ENST00000623531 1380 ntBASIC19.18■□□□□ 0.66
EFNB3Q15768 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFNB3Q15768 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.17■□□□□ 0.66
EFNB3Q15768 LINC01124-201ENST00000409786 2117 ntBASIC19.17■□□□□ 0.66
EFNB3Q15768 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.17■□□□□ 0.66
EFNB3Q15768 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.17■□□□□ 0.66
EFNB3Q15768 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.17■□□□□ 0.66
EFNB3Q15768 AL139125.2-201ENST00000623134 1869 ntBASIC19.17■□□□□ 0.66
EFNB3Q15768 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFNB3Q15768 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.17■□□□□ 0.66
EFNB3Q15768 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
EFNB3Q15768 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EFNB3Q15768 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 MIR935-201ENST00000401179 91 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 AC027682.1-201ENST00000562846 899 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 pRNA.6-201ENST00000610482 90 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 pRNA.5-201ENST00000612139 90 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 pRNA.11-201ENST00000618423 90 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 pRNA.13-201ENST00000619112 90 ntBASIC19.16■□□□□ 0.66
EFNB3Q15768 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
EFNB3Q15768 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFNB3Q15768 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.16■□□□□ 0.66
EFNB3Q15768 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
EFNB3Q15768 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.15■□□□□ 0.66
EFNB3Q15768 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFNB3Q15768 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
EFNB3Q15768 RASA4CP-201ENST00000424092 1398 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms