Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LRP1Q07954 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.5□□□□□ -0.25
LRP1Q07954 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRP1Q07954 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRP1Q07954 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRP1Q07954 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LRP1Q07954 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 IGHV3-19-201ENST00000521488 291 ntBASIC13.5□□□□□ -0.25
LRP1Q07954 AC008687.6-201ENST00000596318 630 ntBASIC13.5□□□□□ -0.25
LRP1Q07954 AC091060.1-201ENST00000623524 1766 ntBASIC13.5□□□□□ -0.25
LRP1Q07954 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRP1Q07954 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 AC126544.1-201ENST00000580842 1059 ntBASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
LRP1Q07954 MIR572-201ENST00000384983 95 ntBASIC13.49□□□□□ -0.25
LRP1Q07954 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.49□□□□□ -0.25
LRP1Q07954 TSPY20P-201ENST00000450910 630 ntBASIC13.49□□□□□ -0.25
LRP1Q07954 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRP1Q07954 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.49□□□□□ -0.25
LRP1Q07954 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC13.49□□□□□ -0.25
LRP1Q07954 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRP1Q07954 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRP1Q07954 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRP1Q07954 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.48□□□□□ -0.25
LRP1Q07954 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LRP1Q07954 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.48□□□□□ -0.25
LRP1Q07954 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRP1Q07954 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
LRP1Q07954 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRP1Q07954 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 AL355802.2-201ENST00000402069 882 ntBASIC13.47□□□□□ -0.25
LRP1Q07954 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LRP1Q07954 KRT18P6-201ENST00000555540 1265 ntBASIC13.47□□□□□ -0.25
LRP1Q07954 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.47□□□□□ -0.25
LRP1Q07954 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.47□□□□□ -0.25
LRP1Q07954 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.47□□□□□ -0.25
LRP1Q07954 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC13.47□□□□□ -0.25
LRP1Q07954 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LRP1Q07954 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC13.47□□□□□ -0.25
LRP1Q07954 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRP1Q07954 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.47□□□□□ -0.25
LRP1Q07954 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.47□□□□□ -0.25
LRP1Q07954 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC13.47□□□□□ -0.25
LRP1Q07954 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.46□□□□□ -0.25
LRP1Q07954 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.46□□□□□ -0.25
LRP1Q07954 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.46□□□□□ -0.25
LRP1Q07954 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.46□□□□□ -0.25
LRP1Q07954 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.46□□□□□ -0.25
LRP1Q07954 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.46□□□□□ -0.25
LRP1Q07954 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRP1Q07954 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.46□□□□□ -0.26
LRP1Q07954 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LRP1Q07954 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
LRP1Q07954 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LRP1Q07954 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRP1Q07954 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRP1Q07954 NCF1B-203ENST00000435988 1254 ntBASIC13.45□□□□□ -0.26
LRP1Q07954 AC026185.1-201ENST00000445748 174 ntBASIC13.45□□□□□ -0.26
LRP1Q07954 TPRG1LP1-201ENST00000598702 760 ntBASIC13.45□□□□□ -0.26
LRP1Q07954 AL499627.2-201ENST00000606283 725 ntBASIC13.45□□□□□ -0.26
LRP1Q07954 AL109923.1-201ENST00000618799 583 ntBASIC13.45□□□□□ -0.26
LRP1Q07954 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRP1Q07954 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC13.45□□□□□ -0.26
LRP1Q07954 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRP1Q07954 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LRP1Q07954 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC13.45□□□□□ -0.26
LRP1Q07954 STK32C-205ENST00000456004 607 ntTSL 2 BASIC13.45□□□□□ -0.26
LRP1Q07954 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.45□□□□□ -0.26
LRP1Q07954 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.45□□□□□ -0.26
LRP1Q07954 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms