Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN20P56880 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN20P56880 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 AL356740.2-201ENST00000601559 647 ntBASIC20.55■□□□□ 0.88
CLDN20P56880 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN20P56880 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN20P56880 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN20P56880 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLDN20P56880 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN20P56880 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLDN20P56880 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLDN20P56880 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN20P56880 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN20P56880 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLDN20P56880 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CLDN20P56880 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN20P56880 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN20P56880 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN20P56880 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN20P56880 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN20P56880 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN20P56880 ALDH1A3-203ENST00000557963 1670 ntBASIC20.51■□□□□ 0.87
CLDN20P56880 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN20P56880 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN20P56880 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN20P56880 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN20P56880 AC131281.2-201ENST00000520478 145 ntBASIC20.51■□□□□ 0.87
CLDN20P56880 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN20P56880 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN20P56880 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN20P56880 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN20P56880 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN20P56880 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN20P56880 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLDN20P56880 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CLDN20P56880 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN20P56880 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN20P56880 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN20P56880 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN20P56880 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.5■□□□□ 0.87
CLDN20P56880 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN20P56880 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN20P56880 AC141586.4-201ENST00000624558 1573 ntBASIC20.5■□□□□ 0.87
CLDN20P56880 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN20P56880 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN20P56880 AC008406.3-201ENST00000620001 1374 ntBASIC20.49■□□□□ 0.87
CLDN20P56880 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLDN20P56880 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLDN20P56880 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN20P56880 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN20P56880 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN20P56880 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN20P56880 AC004812.2-201ENST00000611079 2094 ntBASIC20.49■□□□□ 0.87
CLDN20P56880 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN20P56880 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN20P56880 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN20P56880 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms