Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUMO3P55854 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUMO3P55854 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.41■□□□□ 0.86
SUMO3P55854 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUMO3P55854 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.41■□□□□ 0.86
SUMO3P55854 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUMO3P55854 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SUMO3P55854 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 DUSP8P5-201ENST00000422884 1815 ntBASIC20.4■□□□□ 0.86
SUMO3P55854 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.4■□□□□ 0.86
SUMO3P55854 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.4■□□□□ 0.86
SUMO3P55854 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUMO3P55854 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SUMO3P55854 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.39■□□□□ 0.86
SUMO3P55854 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SUMO3P55854 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.39■□□□□ 0.86
SUMO3P55854 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SUMO3P55854 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SUMO3P55854 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUMO3P55854 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUMO3P55854 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUMO3P55854 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.39■□□□□ 0.85
SUMO3P55854 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.39■□□□□ 0.85
SUMO3P55854 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUMO3P55854 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUMO3P55854 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SUMO3P55854 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUMO3P55854 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUMO3P55854 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUMO3P55854 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SUMO3P55854 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.38■□□□□ 0.85
SUMO3P55854 LINC01529-204ENST00000636474 1715 ntBASIC20.38■□□□□ 0.85
SUMO3P55854 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 DUSP8P3-201ENST00000399571 1760 ntBASIC20.37■□□□□ 0.85
SUMO3P55854 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.37■□□□□ 0.85
SUMO3P55854 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.37■□□□□ 0.85
SUMO3P55854 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.37■□□□□ 0.85
SUMO3P55854 AL512631.2-201ENST00000604634 923 ntBASIC20.37■□□□□ 0.85
SUMO3P55854 AC241377.3-202ENST00000626088 1088 ntBASIC20.37■□□□□ 0.85
SUMO3P55854 AC241585.3-202ENST00000628937 1088 ntBASIC20.37■□□□□ 0.85
SUMO3P55854 AC245100.8-202ENST00000629247 1058 ntBASIC20.37■□□□□ 0.85
SUMO3P55854 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.37■□□□□ 0.85
SUMO3P55854 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUMO3P55854 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUMO3P55854 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.36■□□□□ 0.85
SUMO3P55854 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.36■□□□□ 0.85
SUMO3P55854 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUMO3P55854 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUMO3P55854 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.36■□□□□ 0.85
SUMO3P55854 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 DUX4L4-201ENST00000566884 1269 ntBASIC20.36■□□□□ 0.85
SUMO3P55854 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.36■□□□□ 0.85
SUMO3P55854 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUMO3P55854 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUMO3P55854 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
SUMO3P55854 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SUMO3P55854 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SUMO3P55854 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.35■□□□□ 0.85
SUMO3P55854 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.35■□□□□ 0.85
SUMO3P55854 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
SUMO3P55854 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.35■□□□□ 0.85
SUMO3P55854 SRD5A1P1-201ENST00000442297 786 ntBASIC20.35■□□□□ 0.85
SUMO3P55854 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SUMO3P55854 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.35■□□□□ 0.85
SUMO3P55854 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SUMO3P55854 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SUMO3P55854 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SUMO3P55854 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SUMO3P55854 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.34■□□□□ 0.85
SUMO3P55854 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SUMO3P55854 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.34■□□□□ 0.85
SUMO3P55854 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
SUMO3P55854 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.34■□□□□ 0.85
SUMO3P55854 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.34■□□□□ 0.85
SUMO3P55854 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
SUMO3P55854 AC092171.4-201ENST00000609130 632 ntBASIC20.34■□□□□ 0.85
SUMO3P55854 AC131212.1-201ENST00000613771 668 ntBASIC20.34■□□□□ 0.85
SUMO3P55854 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.34■□□□□ 0.85
SUMO3P55854 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SUMO3P55854 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms